Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00832 ATGCGCGCACGTTCGTTTGTGCGCGCACCAACCCGTCTCATGGCTCGTAACGATCTACCATGGCTTTCGACGTTCATTCTCGTGTTCTTATGTATAGTTTGTTCTTCGACTGCATCGGACTCCGATACCCTCTTCAAGTTCAAGGAATCGCTAGCGAACGATGTTGCACTAGGCAATTGGAATGCATCGACGACGCCGTGTTCGGGTAATAAGGGTAATTGGGTTGGTGTTCTTTGTTCAAATGGGATCATATGGGGATTGCAATTAGAGAACATGGGTCTAATGGGTCTCATTGATGTTGATTCGCTTGTCGACTTGCCGAGCCTAAGGACGCTAAGCTTCATGAACAATAGTTTCGACGGTCCGATGCCGACCATAAAAAATCTTGGCGCTTTGAAGTCGATGTACCTGTCGAATAACCGTTTTTCGGGCGAAATTCGAGACGATGCTTTTGTGGGCATGGGGTCATTGAAGAAGCTACACCTGGCTCAAAATGGATTTACAGGTAAAATTCCCTCGTCTCTTGTTGGGTTGCCTAAGCTTTTGGAGTTGAGGCTTGAGGGGAACATGTTCGAAGGCAAAATACCGAATTTTCGACAGAAGGATTTGAAAACGGTGAATGTATCAAACAATAAATTGGTGGGTCCAATTCCATCACACCTAAGCAAGATGAGTACGAGCTCCTTTTTAGGTAACAGAGATCTATGTGGGGAGCCTATGGACTCATGCAAGTCCTCCAACTCCAAGAAACTGATTATCATCATTGGGATAGTTGTAGGGGTTGCACTACTTTTAGTTGCTGGTGCAGTCTTCGTCGTTCTCCGGCGCCCGCACCAACCATCGAAAATGGGCCGAGCCCCATCTTCGAAATATTCAAAGAAGGTAACGTCTAGCGATGCAGACATAATGGAGCACGGGTCACCTGAGCACGGCAGCTCCAGTAAGAAGGTGGAACACGGGAAGTTGGTGTTTATTAGGGATGATAGAGAGAGGTTTGATTTACAAGACTTGCTTAGAGCCTCAGCTGAGGTTTTGGGTAGTGGGAACTTTGGGTCTTCTTACAAGGCTGTCCTTTTGAATGGGTCATCCATGGTGGTGAAGAGGTTTAAACAAATGAACAATGTGGGGAGAGAAGAGTTTCAAGAGCACATGAGAAGGCTAGGGAGGTTGAGACACCCTAACTTGCTATCTCTTGTGGCCTTCTACTATAGAAAGGAAGAGAAACTATTGGTATCAGACTTTGTTGGGAATGGTAGCTTGGCTGATCACCTCCATGGCAACCGGACTTCACAGCGGCCGGGGCTTGATTGGCCAACCCGCTTGAAAATCATCAAAGGAGTAGCCAAGGGACTGACTCACCTCTACAACGAGCTCCCTAGTCTCATTGTACCCCATGGTCACCTGAAGTCATCGAATGTGCTTCTAAACAAGTCGTTCGAGCCCCTCTTGACAGATTATGCATTGGTACCTGTCGTCAACCAAGAACATGCTACACAAATCATGGTAGCCTACAAGTCACCAGAATACGCACAATATGGCCGAACAACAAAGAAGACCGACGTCTGGAGCCTAGGGATATTGATACTAGAGATGTTGACGGGCAAGTTTCCGGCGAATTATCTAAAACAAGGTAAGGGAGATCGTAACTCCGATTTGGCAAGTTGGGTAAACTCAGTTGTTAGGGAAGAATGGACAGGTGAGGTGTTTGATAATGAGATGAGAAAGACGAAGAACGGGGAAGGCGAGATGCTAAAGCTGTTGAAGATTGGATTGGGTTGTAGTGAGAGGGATGTAGAGAAGAGATGGGATTGGAAAGAAGCTGTTGAGAGGATTGAAGAGTTGAAAGAGAGGGACAGTGTTGAAGATTACTCTTCATATGATGCTAGTGAAGGGGACATGTATTCCTCAAGAGCAATGACTGAGGAAGACTTCTCTTTCTCTATGAAGACTTGA 1953 0.4629 MRARSFVRAPTRLMARNDLPWLSTFILVFLCIVCSSTASDSDTLFKFKESLANDVALGNWNASTTPCSGNKGNWVGVLCSNGIIWGLQLENMGLMGLIDVDSLVDLPSLRTLSFMNNSFDGPMPTIKNLGALKSMYLSNNRFSGEIRDDAFVGMGSLKKLHLAQNGFTGKIPSSLVGLPKLLELRLEGNMFEGKIPNFRQKDLKTVNVSNNKLVGPIPSHLSKMSTSSFLGNRDLCGEPMDSCKSSNSKKLIIIIGIVVGVALLLVAGAVFVVLRRPHQPSKMGRAPSSKYSKKVTSSDADIMEHGSPEHGSSSKKVEHGKLVFIRDDRERFDLQDLLRASAEVLGSGNFGSSYKAVLLNGSSMVVKRFKQMNNVGREEFQEHMRRLGRLRHPNLLSLVAFYYRKEEKLLVSDFVGNGSLADHLHGNRTSQRPGLDWPTRLKIIKGVAKGLTHLYNELPSLIVPHGHLKSSNVLLNKSFEPLLTDYALVPVVNQEHATQIMVAYKSPEYAQYGRTTKKTDVWSLGILILEMLTGKFPANYLKQGKGDRNSDLASWVNSVVREEWTGEVFDNEMRKTKNGEGEMLKLLKIGLGCSERDVEKRWDWKEAVERIEELKERDSVEDYSSYDASEGDMYSSRAMTEEDFSFSMKT* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00832 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 618 IPR046959 -
Eupl09g00832 650 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00832 650 SMART serkin_6 339 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00832 650 Gene3D Ribonuclease Inhibitor 33 199 IPR032675 -
Eupl09g00832 650 SUPERFAMILY Protein kinase-like (PK-like) 343 615 IPR011009 -
Eupl09g00832 650 MobiDBLite consensus disorder prediction 297 314 - -
Eupl09g00832 650 Gene3D Phosphorylase Kinase; domain 1 307 414 - -
Eupl09g00832 650 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 100 195 - -
Eupl09g00832 650 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Eupl09g00832 650 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Eupl09g00832 650 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00832 650 FunFam pollen receptor-like kinase 1 308 414 - -
Eupl09g00832 650 SUPERFAMILY L domain-like 65 225 - -
Eupl09g00832 650 Gene3D Ribonuclease Inhibitor 203 243 IPR032675 -
Eupl09g00832 650 MobiDBLite consensus disorder prediction 279 314 - -
Eupl09g00832 650 FunFam Pollen receptor-like kinase 1 415 625 - -
Eupl09g00832 650 Gene3D Transferase(Phosphotransferase) domain 1 415 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00832 Eupl-Chr9 17812369 17816647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00832 39 647 Receptor kinase-like Gene Family AT5G35390 55.054 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl09g00832 Pkinase 3.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00832 - - vvi:104878991 791.571