Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00822 ATGGGGAACTGCTTCACTTTGGAAGAACCAGATGTTGAGAAGAAGCCAGTTGAAAAATGCAATACCGCAGCTACATCTCCATCCAAACAAAACAGAGCCACAACAATGGCTTCTGGGGCAAACAGTGCTGTTAGCAACCCGGTGACTCCCAAAAATGTCACAGATCTCCGCCAGAACCCTGGATATAATAACGTCGACATCTTTTCATATAACGAGATGAGACTGGCCACTAAGAACTTCCGCCCAGATCAAATTCTTGGTGAGGGCGGGTTTGGGATCGTCTACAAAGGAGTTTTAGATGAGAACGTCAGGCCAGGTTGCAAGAGCACCCAAGTTGCCATTAAAGAGCTTAATCCAGAAGGATTCCAAGGCGACAGGGAGTGGCTGGCGGAGGTCAACTATCTTGGGCAGCTTAGTCACCCGAACCTTGTGAAACTTATTGGTTACTGCTGTGAAGATGAGCACAGGCTGTTGGTCTATGAATACATGGCATGTGGGAGCTTGGAAAAGCACCTTTTCCGACGGGTATGTGTCACAATGCCTTGGTCAACTAGAATGAAGATTGCTATGGGTGCAGCAAAAGGGCTAGCTTTTCTTCATGGAGCCGAAAGATCTATCATATATCGCGACTTCAAGACGTCAAACATCTTGCTGGATACGGATTATAATGCTAAACTTTCAGACTTTGGACTTGCGAAGGATGGACCTATGGGAGACCAGACCCATGTTTCAACACGAGTGATGGGTACTTATGGATATGCAGCTCCGGAGTACGTAATGACTGGTCATCTAACAGCTCGAAGCGATGTTTATGGTTTTGGGGTTGTACTCCTTGAGATGCTCATCGGAAGAAGAGCAATGGATAAAAGCAGACCTAGCCGAGAACACAACCTGGTCGAGTGGGCACGCCCGCTCTTGAATCATAACAAGAAATTGCTGAGGATCTTAGATCCAAGAATGGAAGGTCAGTACTCAGTCAGAGCTGCCCAAAAGGTAGCCAACTTGGCATACCAGTGCCTTAGTCAGAATCCCAAAGGGAGACCTACCATGAGCCAGGTAGTTGAGATACTGGAGGCTTTTCAAACACCAGCTGAAAACCAGGAAGACACACTACTGCATAGCGCAGGTAGCAGTGTAACCCTGTATGAGGTTCCCAAGAGCCCCTTAGATAATACGACGGAGGGGAAGAAAAGCCCAAGAAAGAGTGAGGGGGTAAGGGAACCTGTCATGCATCGCTCGCAACGGACCAAACCAGTGAATGGCAGAAGCAAAAGCGAACCTCCTACTGAATATGATCTGTACAGCCATTCTCCAGATTTTGAGCCCGAGGGGAAGAAATTGGCTTCTAAGAGAAATGGTTGTGAGAAACCATCAATGGATGGAGTTGATCTGTATAAGCTATGA 1404 0.4722 MGNCFTLEEPDVEKKPVEKCNTAATSPSKQNRATTMASGANSAVSNPVTPKNVTDLRQNPGYNNVDIFSYNEMRLATKNFRPDQILGEGGFGIVYKGVLDENVRPGCKSTQVAIKELNPEGFQGDREWLAEVNYLGQLSHPNLVKLIGYCCEDEHRLLVYEYMACGSLEKHLFRRVCVTMPWSTRMKIAMGAAKGLAFLHGAERSIIYRDFKTSNILLDTDYNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMLIGRRAMDKSRPSREHNLVEWARPLLNHNKKLLRILDPRMEGQYSVRAAQKVANLAYQCLSQNPKGRPTMSQVVEILEAFQTPAENQEDTLLHSAGSSVTLYEVPKSPLDNTTEGKKSPRKSEGVREPVMHRSQRTKPVNGRSKSEPPTEYDLYSHSPDFEPEGKKLASKRNGCEKPSMDGVDLYKL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00822 467 ProSiteProfiles Protein kinase domain profile. 80 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00822 467 ProSitePatterns Protein kinases ATP-binding region signature. 86 115 IPR017441 GO:0005524
Eupl09g00822 467 MobiDBLite consensus disorder prediction 15 56 - -
Eupl09g00822 467 CDD STKc_IRAK 86 358 - -
Eupl09g00822 467 SUPERFAMILY Protein kinase-like (PK-like) 62 371 IPR011009 -
Eupl09g00822 467 Pfam Protein kinase domain 82 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00822 467 MobiDBLite consensus disorder prediction 382 467 - -
Eupl09g00822 467 FunFam Probable serine/threonine-protein kinase PBL8 163 375 - -
Eupl09g00822 467 MobiDBLite consensus disorder prediction 436 457 - -
Eupl09g00822 467 Gene3D Phosphorylase Kinase; domain 1 55 162 - -
Eupl09g00822 467 MobiDBLite consensus disorder prediction 21 56 - -
Eupl09g00822 467 Gene3D Transferase(Phosphotransferase) domain 1 163 379 - -
Eupl09g00822 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Eupl09g00822 467 MobiDBLite consensus disorder prediction 393 413 - -
Eupl09g00822 467 FunFam Serine/threonine-protein kinase BIK1 47 162 - -
Eupl09g00822 467 PANTHER OS01G0588500 PROTEIN-RELATED 36 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00822 Eupl-Chr9 17651789 17656419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00822 37 393 Glycoside Hydrolase AT3G07070 45.504 1.15e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl09g00822 Pkinase 3.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00822 - - nnu:104589200 756.518