Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00817 ATGGAGGGGTTTCCCTATTCCATTCCTTTTCTTTGCATTCATGGCGGAATCAACTCCTTCCTCTTCTTCTTTTTTTCAGCAAACCCTTCGAATCTCTGGTTCTGGTTGAGAAAAACAGCTAATTTTATGGTCTGTTTGTACGAGAAGATGGTTTGGATTTTTTTAGGGTTCTTTGCTCTTACTTTGGGGATCTCAATCCCGGTCGATGCAAAAACCGATGCTCCAGATGTCTCTGCTCTCACAGTGATGTACAACAGCTTGAATTCTCCTTCACAACTGACTGGTTGGAAATCGAGTGGAGGCGACCCTTGTGGCCAATCTTGGAAAGGAATTACGTGTTCAGGCTCATCTGTAACGGAAATAAACCTATCTGGTCTTGGACTGACTGGATCAATGGGATACCAGCTATCAAGCTTGACATCTGTAACCAACTTTGACTTGAGCAAGAACAACCTCAAGGGTGATATACCATATCAACTTCCGCCAAATGCACTTCACATAAATCTTGCTGGGAATGGCTTTACTGGTGGAGTGCCTTATTCAATTTCTCAAATGACTGATCTTAAATATCTAAATCTTGGTCATAATCAGCTTGATGGCCAGTTGAGCGATATGTTTGGACAACTTCCTAGGCTAACTTTGCTGGATCTCTCCTTCAACAGCCTTTCAGGCAACCTGCCTCAGAGTTTTGGATCCCTCTCAAGTCTCACAACATTGCATTTGCATAACAACCAGTTTACTGGTCCAATAAATGTCCTTGCTAATCTTCCCCTTGATGAACTGAATGTTGCAAACAACCAATTTCGTGGCTGGATACCTAACGAGTTGAAGAATATAAACGATATAGAGACTGGAGGAAATTCTTGGTCGTCTGGTCCTGCACCTCCTCCTCCTCCCGGTTCACCTATGAGTGAAAAAAGTTCCCATGGTAGTAAGCACTCATCTAAAGGTGGAAGCAAGAAGTCGGGTCTGAGTGGAGCAGCCATTGCGGGGATAGGGATAAGTGTGTTGGTGGCACTTGTGATTCTAATTGCTTTATTTTCACGGAAATCTTCTTCTTCTTCGCATTTTCTTGATGAAGAGAAGCTTAGTCAGCGCAGGCCATTTACTTCCCTAGTATCTTGTGAGTTATCGAACGACCTACCCCATGACTTACTTCGTGACATACCAAATGGCTTCAAAGAGCCGAAATCATTGGAATCATCTCCTTCAACCAGAGTGAAGGGTTTGCAAACATCTCCTTCAATGGGTCTTAAGCCTCCACCTTCTGACCGGATCAAATCATTTAATGATACCGAGTTTGCGAACCGACTGAATGTAAAAAGAAGCACATCCATTCGTGCTGTAACTTATTCCTTGGCAGATTTGCAGGCTGCCACCGGTAACTTTGCTACTGGTCGCCTTCTTGGTGAGGGATCCGTTGGACGTGTTTATAGGGCAAAATATGTGGATGGGAAGGTTTTGGCTGTGAAAAAGATAGACTCTGCACTTCTTCAAAGTGGGAGCCGTGAAGATTTCACAGAAATGATTTCAAGTATCTCGAAACTGCACCATCCAAACATTGCTGAACTTGTTGGTTATTGTTCGGAGCAGGGCCATAATCTGTTAGTCTGCGAGTACTTCAGGAATGGGTCACTTCACGAGTTTTTACACCTGTCAGATGACTACAGCAAGCCACTGACGTGGAACACCCGAATCAGGATTGCTCTAGGCACAGCCCGGGCAGTAGAGTACCTCCATGAGATCTGTTCGCCTTCCTCTGTTCACAAGAATATCAAATCGGCCAATATCTTGCTAGACACCGAACTCAATCCCCGTCTCTCAGACTGCGGTTTGGCAACCTTTCACCAGCATACAAGCCAAAACCTTGGGGTTGGATACAATGCTCCAGAGTGCACCAAGCCATCGGCCTATACAATGAAGAGCGATGTGTACAGTTTTGGGGTGGTTATGTTGGAGCTGTTGACGGGTCGAATGCCTTTTGACAGTTCAAAACCGAGAATGGACCAGTCTCTAGTCCGGTGGGCCACGCCACAGCTTCATGATATTGATGCATTGGCCAAGATGGTGGACCCTGCTCTACGCGGGCTTTACCCTCCCAAGTCACTATCTCGATTTGCCGATGTCATTGCTCTCTGTGTCCAGTCCGAGCCAGAATTCCGGCCGCCAATGTCAGAGGTGGTGCAAGCGCTCGTGCGGTTGGTTCAGCGGTCGAGTATGAACAAGAGAGGAGAAGATCCAGGTGCTTCTCGTCGGACAGATGACTCAGACCACTCAGATTATAACTGA 2289 0.4596 MEGFPYSIPFLCIHGGINSFLFFFFSANPSNLWFWLRKTANFMVCLYEKMVWIFLGFFALTLGISIPVDAKTDAPDVSALTVMYNSLNSPSQLTGWKSSGGDPCGQSWKGITCSGSSVTEINLSGLGLTGSMGYQLSSLTSVTNFDLSKNNLKGDIPYQLPPNALHINLAGNGFTGGVPYSISQMTDLKYLNLGHNQLDGQLSDMFGQLPRLTLLDLSFNSLSGNLPQSFGSLSSLTTLHLHNNQFTGPINVLANLPLDELNVANNQFRGWIPNELKNINDIETGGNSWSSGPAPPPPPGSPMSEKSSHGSKHSSKGGSKKSGLSGAAIAGIGISVLVALVILIALFSRKSSSSSHFLDEEKLSQRRPFTSLVSCELSNDLPHDLLRDIPNGFKEPKSLESSPSTRVKGLQTSPSMGLKPPPSDRIKSFNDTEFANRLNVKRSTSIRAVTYSLADLQAATGNFATGRLLGEGSVGRVYRAKYVDGKVLAVKKIDSALLQSGSREDFTEMISSISKLHHPNIAELVGYCSEQGHNLLVCEYFRNGSLHEFLHLSDDYSKPLTWNTRIRIALGTARAVEYLHEICSPSSVHKNIKSANILLDTELNPRLSDCGLATFHQHTSQNLGVGYNAPECTKPSAYTMKSDVYSFGVVMLELLTGRMPFDSSKPRMDQSLVRWATPQLHDIDALAKMVDPALRGLYPPKSLSRFADVIALCVQSEPEFRPPMSEVVQALVRLVQRSSMNKRGEDPGASRRTDDSDHSDYN* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00817 762 Gene3D Transferase(Phosphotransferase) domain 1 541 757 - -
Eupl09g00817 762 SMART LRR_typ_2 209 232 IPR003591 -
Eupl09g00817 762 SMART LRR_typ_2 233 255 IPR003591 -
Eupl09g00817 762 SMART LRR_typ_2 139 167 IPR003591 -
Eupl09g00817 762 SMART LRR_typ_2 185 208 IPR003591 -
Eupl09g00817 762 SUPERFAMILY Protein kinase-like (PK-like) 444 731 IPR011009 -
Eupl09g00817 762 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 73 300 - -
Eupl09g00817 762 MobiDBLite consensus disorder prediction 282 322 - -
Eupl09g00817 762 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 541 745 - -
Eupl09g00817 762 Pfam Protein tyrosine and serine/threonine kinase 465 731 IPR001245 GO:0004672|GO:0006468
Eupl09g00817 762 SMART serkin_6 463 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00817 762 MobiDBLite consensus disorder prediction 739 762 - -
Eupl09g00817 762 MobiDBLite consensus disorder prediction 744 762 - -
Eupl09g00817 762 Pfam Leucine rich repeat N-terminal domain 74 114 IPR013210 -
Eupl09g00817 762 Gene3D Phosphorylase Kinase; domain 1 427 540 - -
Eupl09g00817 762 ProSiteProfiles Protein kinase domain profile. 463 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00817 762 Pfam Leucine rich repeat 167 222 IPR001611 GO:0005515
Eupl09g00817 762 MobiDBLite consensus disorder prediction 397 418 - -
Eupl09g00817 762 SUPERFAMILY L domain-like 74 282 - -
Eupl09g00817 762 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 60 736 IPR046959 -
Eupl09g00817 762 Gene3D Ribonuclease Inhibitor 74 308 IPR032675 -
Eupl09g00817 762 MobiDBLite consensus disorder prediction 392 423 - -
Eupl09g00817 762 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 428 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00817 Eupl-Chr9 17505527 17527990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00817 46 758 Strubbelig Receptor Gene Family AT1G78980 61.818 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Eupl09g00817 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00817 - - ming:122059474 1022.31