Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00805 ATGGTTTCCATGTCGAACAAAGCTGGAACAGGTGGACTCCGGCGAAAGAGAACAAAGGGGCCCTTCAGAGGAGTGCGGATGAGGAAATGGGGGAGATGGGTGTCAGAAATACGTATTCCAAATAGCAAATCGCGGATTTGGTTAGGTTCGTATGATACTCCAGAGAAGGCGGCTCGAGCATATGATGCTGCGCTCTATTGTCTGCGTGGTTCGAAAGGAAAATTCAATTTTCCTGATGATAAACACCCGGAAATTCCCAATGGGTCATCAGTCCCTCTCTCGAAGACAGATATAAAAGCAGTTGCAGCAGGGTTCGCATCAAGCAGTTGCATGTCAGTGCAAGCCTCAACATCTTCATTTACAACTCTCACGAGCTTGCCAGAAGGGCCGGTTACAACAACAACTGAGACGGGGAGCACATGCAAGGTTGCTGACTCAGTTTTCGCAGCTGGGGTGTCGGAACCTGATACGTTTTCACCGGAAAGTTTCCTGTTGGACGATCCTTTCATGTTTGAGCCGGACTGCATATGGGATATATTAGAAGAAAATACAAATTTTGAAGACGAGAAGTAA 573 0.4712 MVSMSNKAGTGGLRRKRTKGPFRGVRMRKWGRWVSEIRIPNSKSRIWLGSYDTPEKAARAYDAALYCLRGSKGKFNFPDDKHPEIPNGSSVPLSKTDIKAVAAGFASSSCMSVQASTSSFTTLTSLPEGPVTTTTETGSTCKVADSVFAAGVSEPDTFSPESFLLDDPFMFEPDCIWDILEENTNFEDEK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00805 190 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 MobiDBLite consensus disorder prediction 1 20 - -
Eupl09g00805 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 121 - -
Eupl09g00805 190 Gene3D AP2/ERF domain 21 79 IPR036955 GO:0003700|GO:0006355
Eupl09g00805 190 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 SUPERFAMILY DNA-binding domain 22 79 IPR016177 GO:0003677
Eupl09g00805 190 Pfam AP2 domain 22 70 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Eupl09g00805 190 FunFam Ethylene-responsive transcription factor 2 20 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00805 Eupl-Chr9 17350445 17351017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00805 12 180 AP2-EREBP Transcription Factor Family AT4G31060 44.186 8.06e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl09g00805 AP2 4.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00805 - - psom:113298963 214.157