Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00795 ATGAAGCCGGTAGTGGGGATGGTGGTCTCGAACAAGATGCAGAAATCAGTGGTGGTGGCTGTGGATCGTCTCTTCCATCACAAGTTGTACAATCGGTATATCAAGAGAACCAGCAAATTCATGGCTCATGATGAGACCAATGAATGCAACATCGGCGACCGAGTTAGATTGGATCCTTCTAGGCCATTAAGCAAACGGAAGAACTGGGTTGTCGCAGAAATTCTGAAGAAAGCACGGATTTATGTTCCACCATCAGCAGGAGCTCCTGCGGCTAATTCAAGCAGTAAGACTGAAGCAGTTTCTTCTCCGTCTCTTAAGGTAAACCAGTCTTGA 333 0.4655 MKPVVGMVVSNKMQKSVVVAVDRLFHHKLYNRYIKRTSKFMAHDETNECNIGDRVRLDPSRPLSKRKNWVVAEILKKARIYVPPSAGAPAANSSSKTEAVSSPSLKVNQS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00795 110 Hamap 30S ribosomal protein S17 [rpsQ]. 1 76 IPR019984 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 PRINTS Ribosomal protein S17 family signature 20 43 IPR000266 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 PRINTS Ribosomal protein S17 family signature 52 62 IPR000266 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 PRINTS Ribosomal protein S17 family signature 62 69 IPR000266 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 Gene3D - 1 100 IPR012340 -
Eupl09g00795 110 Pfam Ribosomal protein S17 6 73 IPR000266 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 NCBIfam 30S ribosomal protein S17 3 71 IPR019984 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 FunFam 30S ribosomal protein S17 1 101 - -
Eupl09g00795 110 MobiDBLite consensus disorder prediction 88 110 - -
Eupl09g00795 110 SUPERFAMILY Nucleic acid-binding proteins 2 92 IPR012340 -
Eupl09g00795 110 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 2 84 IPR000266 GO:0003735|GO:0005840|GO:0006412
Eupl09g00795 110 MobiDBLite consensus disorder prediction 84 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00795 Eupl-Chr9 17258765 17264881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00795 6 75 Cytoplasmic Ribosomal Protein Gene Family AT4G30800 38.028 5.03e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00795 K02961 - msin:131256570 171.785