Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00778 ATGAATTGCCAAAGTATCGTTACCGTAAAACAAAGTGAATCTCCTAAAGGAGTGACACAAACCTACTGTGCTGCCCCCTCTCCAAGTCATAATATATTTAATGCCGACATAAAGAAAGGCAAAAATTTATTAGACGATGAATGTTCATCTGCATGTCCATCTTTGTGTATTCAAACAGAATCACTTAGTTCTTCCAGTCACCAGCAAGCATCCTCATTCCAACCCCAGACGTTAAGTCCAAACCCTGAACCAAGTAACCCTATGTCGTATTGTTCTCATCTCCAGTATCCCAAGAGCATGTTTTCTCGGTCTTCTACCTTCTGTACTAGTTTATACTTATCATCTTCGACAAGCTCAGAGACCCATCGGCAGCTTGGGAACCTACCTTTCCTCCCACATCCCCCAACATGCAACCAGCCCATATCTACTGTTCACTCATCGAAATCTCCTTCATCGTTGAATGGGGATTTAAGCAATCAATTTGCTGAAGAGCATTCTGAGTATTTGATGGACTTCCTTAATTTGCCGGGAGATGCTTTGGATGGTAGCTTCCATGGGGTGGACTACACGAGCGATAGTTTAACATTTACCGAGCAGGTGGAACTACAGATTCTGTCTGAGGAGCTTGACATAGCTATAACAGACAATGGCGAAAATCCAAGGCTTGATGAAATATATGAGGCACCTCAGGTTTCTTCAGTCCCAACTGCTGGATTGAATTGTAATCAGAACCATCTTCATCCTTTGGTCCCACCTGTTGATGGTCAGATCGATTCAAGCCAGCCCAGTCCAGGGGCTGCAGCTGTGCACAAACCAAGAATGAGGTGGACACCTGAGCTCCATGAGTGTTTCGTAGAAGCTGTCAACAAGCTTGATGGGGCTGAAAAGGCAACTCCAAAGGGTATATTGAAGCTTATGAACGTTGAGGGGTTGACCATCTACCATGTGAAAAGCCACCTGCAGAAATACCGACTTGCCAAGTATATGCCAGAAACAAAAGAAGACAAGAAATCTTCCTTCGCTGACGATAGAGAAAAGAAGGCAGCTTCAAACAGCAATGGAAGTGATGCATGCATGAAAAGGGGCATGCAAGTCACAGAGGCTCTCCGCATGCAAATGGAGGTTCAAAAACAACTTCATGAACAACTAGAGGTACAGAGGGCCCTTCAGTTACGTATAGAGGAACATGCAAGGTACCTGCAAAAGATTTTGGAAGAGCAACAGAAAGCTGGCAACACCTTCATGTCTTCTTACAATCCACCATCCTCGACTGATCCACAAACAGATTCTGAACAACGTCCACCATCTCCGTCTGCTGCTCGAGCCGAGTCTAAAACTGACTCTTCTTCGTCTCTCCCATCAAAGCATAAATCCATGGACGGTGATGAAACAGAGCAGCAGGTAGTACCAAGTCAGAAACGGCTCCGGCATGAAGCCAAGTCAGAAATATCTTTGGATGAACCTGTCGTGGAAAGTCCGGTGCAATGA 1488 0.4503 MNCQSIVTVKQSESPKGVTQTYCAAPSPSHNIFNADIKKGKNLLDDECSSACPSLCIQTESLSSSSHQQASSFQPQTLSPNPEPSNPMSYCSHLQYPKSMFSRSSTFCTSLYLSSSTSSETHRQLGNLPFLPHPPTCNQPISTVHSSKSPSSLNGDLSNQFAEEHSEYLMDFLNLPGDALDGSFHGVDYTSDSLTFTEQVELQILSEELDIAITDNGENPRLDEIYEAPQVSSVPTAGLNCNQNHLHPLVPPVDGQIDSSQPSPGAAAVHKPRMRWTPELHECFVEAVNKLDGAEKATPKGILKLMNVEGLTIYHVKSHLQKYRLAKYMPETKEDKKSSFADDREKKAASNSNGSDACMKRGMQVTEALRMQMEVQKQLHEQLEVQRALQLRIEEHARYLQKILEEQQKAGNTFMSSYNPPSSTDPQTDSEQRPPSPSAARAESKTDSSSSLPSKHKSMDGDETEQQVVPSQKRLRHEAKSEISLDEPVVESPVQ* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00778 495 MobiDBLite consensus disorder prediction 413 455 - -
Eupl09g00778 495 MobiDBLite consensus disorder prediction 456 485 - -
Eupl09g00778 495 MobiDBLite consensus disorder prediction 331 350 - -
Eupl09g00778 495 Pfam Myb-like DNA-binding domain 273 324 IPR001005 -
Eupl09g00778 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 268 328 IPR017930 -
Eupl09g00778 495 FunFam Myb family transcription factor 270 328 - -
Eupl09g00778 495 Pfam MYB-CC type transfactor, LHEQLE motif 363 410 IPR025756 -
Eupl09g00778 495 NCBIfam myb-like DNA-binding domain, SHAQKYF class 271 326 IPR006447 GO:0003677
Eupl09g00778 495 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 268 471 IPR044848 GO:0003700
Eupl09g00778 495 MobiDBLite consensus disorder prediction 331 359 - -
Eupl09g00778 495 MobiDBLite consensus disorder prediction 67 89 - -
Eupl09g00778 495 Gene3D - 270 329 - -
Eupl09g00778 495 MobiDBLite consensus disorder prediction 413 495 - -
Eupl09g00778 495 SUPERFAMILY Homeodomain-like 269 325 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00778 Eupl-Chr9 17081094 17095646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00778 106 460 G2-like Transcription Factor Family AT3G13040 53.930 1.66e-115 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl09g00778 Myb_DNA-binding 7.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00778 - - ming:122089347 554.673