Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00741 ATGGATTTCTTGAAAATGGCTGGAAATTCTGAAAAGGAGCAGGAAGTGGGAGAGGATCAGAAGATGAAAGTCCACGACTCGGAGAAGACGGAGGATCGTGCTCATATTACTAATAATAATGCCTTTGAAGCGGGAAAACCCGGTGAAGACGACGTCGGGAAACAGTCAGAGACTGACGGCGCCGACAGTCTTGACTTATTCGGGAAAAATTTGTTGATCCAGCAGGACAAGGTCAAGGACAAGGAAGGGGATGGGGCTTTCTTTCTCAAGCAGAGGCACGTGTCATCTGACCTCCAGGACGCCTCTCCACACATGCAAACTCTCCTCCCACTCCCTACTACCACCACCAGGCCTTCTGGATCAAATGCCATTGCCCCACCTCCAGCTCCAGCGCAGCTCACCATCTTCTATTCCGGAACAGTTAGTGTCTTCGACGCAGTTCCAGCAGAAAAGGCCCAGGCAATTATGCTTATCGCTGCTGCTGCTGCTGCTACCACCACCGCTGCTACTAATAACACAAACAACACAAAGAATGGTAGTGTCCCTTGTGCCCCCACTGCACCGGTGCTCACAAGGTCTCCATCCTTACAGAGCACTGCAGCCATCGTCGCTTCGCCACCACCCCAAATCCATCCCATTCAGAATCCTGCCCTCTGCAATCTGCAAGCTGAACTTCCCATTGCAAGGAGGCACTCTCTTCAGCGCTTCTTAGAGAAGCGTCGCGACAGATTGGTGAGCAAGAGCCCATACCCTCCCTCAACACCGACAAGAGCGGCAGACAACACGGGCAGCAGTCTCAGCACTGAAGCGTCACCCCAGCTGGGTTGCTTCTATGAGACTCCCAAGCCTCAACAAGAAGTCCCACCAGCAGTTGCCACCCACCTTGCATGA 891 0.5297 MDFLKMAGNSEKEQEVGEDQKMKVHDSEKTEDRAHITNNNAFEAGKPGEDDVGKQSETDGADSLDLFGKNLLIQQDKVKDKEGDGAFFLKQRHVSSDLQDASPHMQTLLPLPTTTTRPSGSNAIAPPPAPAQLTIFYSGTVSVFDAVPAEKAQAIMLIAAAAAATTTAATNNTNNTKNGSVPCAPTAPVLTRSPSLQSTAAIVASPPPQIHPIQNPALCNLQAELPIARRHSLQRFLEKRRDRLVSKSPYPPSTPTRAADNTGSSLSTEASPQLGCFYETPKPQQEVPPAVATHLA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00741 296 Pfam tify domain 127 160 IPR010399 -
Eupl09g00741 296 ProSiteProfiles Tify domain profile. 126 161 IPR010399 -
Eupl09g00741 296 MobiDBLite consensus disorder prediction 1 36 - -
Eupl09g00741 296 MobiDBLite consensus disorder prediction 1 61 - -
Eupl09g00741 296 SMART tify_2 126 161 IPR010399 -
Eupl09g00741 296 MobiDBLite consensus disorder prediction 240 296 - -
Eupl09g00741 296 Pfam Jas motif 226 250 IPR018467 -
Eupl09g00741 296 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 100 261 IPR040390 -
Eupl09g00741 296 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00741 Eupl-Chr9 16451192 16456821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00741 130 253 Tify Gene Family AT5G20900 53.226 1.30e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl09g00741 tify 1.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00741 K13464 - nnu:104589438 228.024