Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00738 ATGCATCATATATTCTTTAGTTCGTTGGAGGAGGTGATCAAACACTTTCTGCACCTGTCTACTGAGAGAGCTGAGCAAGCGCGAAGCCAAGCACATGCCTCGGAGGAGGCTCTGGATGTTGATGACTTGGAAGCGGATAAAAGACCAGAAGACTTAATGCTAAGTTATGTCAGTGGAGAGAAGGGAAAAGATAGGTCTGATCGTGAGCTTGTAACACCGTGGTTCAAATTTCTGTGGGAAACCTACAGAACAGTGCTTGAAATTCTACGTAACAACTCTAAGTTAGAAGCACTTTATGCGATGACAGCACACCGGGCCTTCCAGTTCTGCAAGCAACACAAACGAACAACAGAATTTCGTAGGCTATGTGAAATCATCAGAAATCATTTGGTAAATCTTAACAGATATAGAGACCAGAGAGACAGGCCCGACCTGTCATCTCCAGAAAGCTTACAGCTGTATCTTGATACAAGATTTGAGCAGCTTAAGATTGCAACTGGGCTCGAACTTTGGCAGGAAGCTTTCCGTTCTGTGGAAGATATTCATGGCTTGATGTGCATTGTTAAGAAAACCCCTAAGGCATCCCTGATGGTTATATATTATTCTAAGTTAAACAGAAATATTAAAAGTTACAATAAGAACTTAACCCAGAAGGATTTGCAACTGATAGCATCATCTGTTATGTTAGCTGCGCTTTCAGTGACCCCTTACGACCACATGCATGGTTCATCTCATTTAGAGCTTGAAAATGAGAAAGAGTGCAATTTGAGAATGGCTAGCCTTATAGGGTTTAGTCTTGACCCTAAACACGATAGCAGGGAAGTGGTCTCCAAAGGTGTAATGAACTGTTTATCTCCGGAAGTAAAAGATCTTTATAATCTTTTAGAACATGAGTTTCATCCTTTAGATCTTGCTTCAAAAGTTCAGCCTTTGTTAACCAAGATTTCCAAGCTTGGGGGAAAGCTTTCTTCAGCTTCTTCTGCCTCAGAAGTGCAACTTTTGCAGTATGTTCCTGCCCTGGAAAAGCTTGCTACCTTGAGATTGCTACAGCAGGTTTCTCAGGTGTATCAAACAATGAAGATTGATGTGCTATCTAGGGTGATCCCATTTTTTGATTTCTCGGTCCTGGAAAAGATTTCTGTTGGTGCCGTTAAATCTAATTTTATTGCCATGAAAGTTGACCATCTGAAGGGTGCAGTTCTCTTTGGTAGTTTGGATCTTGAATCTGACAGGCTTCGGGATCACCTGACAATTCTTGCTGAATCTCTGAATAAAGCAAGGGCCCTGATTTATTCTCCAGTAAAAAAAGCATCAAAATTTGGTGAGACTCTGCCTGGTTTGGCAGAGACTGTGGATAAGGAACACAAGAGGCTTCTTGCCCGAAAATCAATAATTGAGAAACGCAAGGAAGAACAAGAACGGCAAATGTTGGAAATGGAACGTGAGGAAGAGTCAAAGAGGCTAAAACTGCAGAAAATAACTGAGGAGGCAGAACAGAAGAGACTTGCCTCTGAATATTCTAGGAGGGAGGAACAAAGGATCCGAAGAGAAATAGAGGAGAGAGAACTTGAAGAAGCCCAGGCTTTACTTCAGGAAGCCGAGAAGCGTAATAAAAAGAAGGGGAAGAAGCCGGTCATAGAAGGAGATAAAGTCACCAAGCAGACCTTAATTGAGTTGGCTTTGAGCGAACAACTCAGAGAGGCAGGAAATGGAGAAGAAATTGCAGAAACTTGCTAA 1737 0.4203 MHHIFFSSLEEVIKHFLHLSTERAEQARSQAHASEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQHKRTTEFRRLCEIIRNHLVNLNRYRDQRDRPDLSSPESLQLYLDTRFEQLKIATGLELWQEAFRSVEDIHGLMCIVKKTPKASLMVIYYSKLNRNIKSYNKNLTQKDLQLIASSVMLAALSVTPYDHMHGSSHLELENEKECNLRMASLIGFSLDPKHDSREVVSKGVMNCLSPEVKDLYNLLEHEFHPLDLASKVQPLLTKISKLGGKLSSASSASEVQLLQYVPALEKLATLRLLQQVSQVYQTMKIDVLSRVIPFFDFSVLEKISVGAVKSNFIAMKVDHLKGAVLFGSLDLESDRLRDHLTILAESLNKARALIYSPVKKASKFGETLPGLAETVDKEHKRLLARKSIIEKRKEEQERQMLEMEREEESKRLKLQKITEEAEQKRLASEYSRREEQRIRREIEERELEEAQALLQEAEKRNKKKGKKPVIEGDKVTKQTLIELALSEQLREAGNGEEIAETC* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00738 578 ProSiteProfiles PCI domain profile. 226 407 IPR000717 -
Eupl09g00738 578 FunFam Eukaryotic translation initiation factor 3 subunit A 141 192 - -
Eupl09g00738 578 Coils Coil 507 543 - -
Eupl09g00738 578 Coils Coil 455 496 - -
Eupl09g00738 578 Gene3D - 272 387 - -
Eupl09g00738 578 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 6 568 IPR027512 GO:0005852
Eupl09g00738 578 Pfam PCI domain 274 403 IPR000717 -
Eupl09g00738 578 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 335 426 IPR000717 -
Eupl09g00738 578 Gene3D UVR domain 141 193 - -
Eupl09g00738 578 Coils Coil 201 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00738 Eupl-Chr9 16388517 16394563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00738 2 567 Eukaryotic Initiation Factors Gene Family AT4G11420 71.644 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00738 K03254 - ming:122059903 841.647