Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00729 ATGGGTGACGAGCTGGAGAAACCGTTGCTTGATCCTGAGAATTTCAATAGAGATGCGATTGATCTGGAACGCTTACCATTGGAAGAAGTTTTTGAACAACTGAGAACATCACGTGGAGGACTTTCATCGGAAGATGGTGAACTCCGCTTGAAGATATTTGGCCCAAACAAGCTCGAGGAAAAGCCGGAGAACAAATTCTTAAAATTTCTTAGTTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCGGCAGTGATGGCAATTGCCCTTGCAAACGGTGGAGGTGAGGGTCCTGACTGGCAGGACTTTGTTGGGATCCTTTGCCTATTGATCATCAACTCGACAATTAGTTTTATAGAAGAAAATAATGCTGGGAATGCTGCATCAGCACTTATGGCTCGTCTAGCACCAAAAACAAAGGTCCTCAGAGATGGGCATTGGCAAGAGCAAGATGCAACCATTCTAGTACCGGGAGATATAGTTAGCATAAAGCTTGGTGATATCATCCCTGCAGATGCCCGCCTGCTTGAGGGAGACCCCCTGAAAATTGATCAGTCAGCTCTTACGGGAGAATCTCTTCCTGTCACAAAAAGGACAGGAGATGAAGTCTTTTCTGGTTCGACATGTAAGCTTGGAGAGATTGAAGCTGTTGTAATAGCCACTGGGGTTCACTCTTTCTTTGGAAAAGCAGCACATTTAGTTGACTCCACTGAAGTTGTTGGACATTTCCAGAAGGTCCTTACTTCCATTGGAAACTTCTGCATTTGCTCCATAGCTGTGGGAATGATTCTTGAAATCATCGTCATGTTCCCTATTCAGCACCGGTCGTACAGGAGTGGAATCAATAACCTTCTTGTTCTTTTAATTGGAGGAATACCAATAGCTATGCCCACTGTATTATCTGTTACACTTGCGATTGGTTCTCATCGCCTCTCTCAACAGGGTGCTATTACGAAACGGATGACTGCTATCGAAGAAATGGCTGGAATGGATGTCCTCTGCAGCGACAAAACTGGAACCCTTACCCTGAATCGCCTCACCGTTGATCGGAACCTTATTGAGGTTTTTAACAAAGACATGGACAGAGATACTATTGTCTTGCTTGCAGCTAGAGCTGCAAGACTCGAGAATCAAGATGCTATTGATGCGGCCATCATTAACATGCTTGCTGATCCAAAGGAGGCACGTGCAAACATCACAGAAGTGCATTTTCTGCCGTTCAATCCTGTGGACAAGCGGACTGCAATTACATACATCGACTCTGATGGTAACTGGCATCGGGCTAGCAAAGGAGCTCCTGAACAGATACTAAACCTATGCCAAGAAAAACAAGAGATCGCTGGAAAAGTGCATGCCATCATCGACAAATTTGCAGAAAGGGGGTTGCGCTCTCTCGGGGTTGCTTGTCAGGCAATTCCTGAGAAATCTAAAGAGAGCCCTGGAGGTCCTTGGACATTTTGTGGGTTGTTGGCGTTGTTTGATCCACCTAGACATGACAGTGCAGAGACCATTCGCAGAGCACTTAACCTTGGGGTCTGTGTCAAGATGATTACAGGTGATCAATTGGCAATTGCAAAGGAGACGGGCCGACGTCTTGGCATGGGAACAAACATGTATCCCTCTTCATCATTGCTGGGCCGTGATAGAGATGAACATGAAGCTCTTCCTGTGGATGAGCTCATCGAAAAGGCAGATGGATTTGCTGGTGTATTCCCTGAACATAAGTATGAGATTGTGAAAATCCTACAAGAAAAGAAGCACGTTTGTGGAATGACTGGAGATGGTGTGAATGATGCACCTGCGTTAAAGAAAGCGGATATTGGAATCGCTGTGTCAGATGCTACAGATGCTGCGAGGAGTGCTGCTGATATAGTCTTAACAGAGCCTGGCTTAAGTGTCATTGTTAGCGCAGTCTTAACAAGCCGAGCTATATTCCAGAGAATGAAGAATTATACGGTTGAGTATCATTCTGTTATTCTGAAGGAAATAATGATAGTTTTATAA 2007 0.4484 MGDELEKPLLDPENFNRDAIDLERLPLEEVFEQLRTSRGGLSSEDGELRLKIFGPNKLEEKPENKFLKFLSFMWNPLSWVMEAAAVMAIALANGGGEGPDWQDFVGILCLLIINSTISFIEENNAGNAASALMARLAPKTKVLRDGHWQEQDATILVPGDIVSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKRTGDEVFSGSTCKLGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRSGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNKDMDRDTIVLLAARAARLENQDAIDAAIINMLADPKEARANITEVHFLPFNPVDKRTAITYIDSDGNWHRASKGAPEQILNLCQEKQEIAGKVHAIIDKFAERGLRSLGVACQAIPEKSKESPGGPWTFCGLLALFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDRDEHEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVCGMTGDGVNDAPALKKADIGIAVSDATDAARSAADIVLTEPGLSVIVSAVLTSRAIFQRMKNYTVEYHSVILKEIMIVL* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00729 668 Pfam E1-E2 ATPase 136 314 - -
Eupl09g00729 668 Gene3D - 332 630 IPR023214 -
Eupl09g00729 668 SUPERFAMILY HAD-like 331 640 IPR036412 -
Eupl09g00729 668 CDD P-type_ATPase_H 40 654 IPR006534 GO:0008553|GO:0016020|GO:0120029
Eupl09g00729 668 Gene3D - 138 222 - -
Eupl09g00729 668 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Eupl09g00729 668 SFLD p-type atpase 317 645 IPR044492 -
Eupl09g00729 668 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 185 199 - -
Eupl09g00729 668 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Eupl09g00729 668 FunFam Plasma membrane ATPase 347 494 - -
Eupl09g00729 668 PANTHER CALCIUM-TRANSPORTING ATPASE 29 654 - -
Eupl09g00729 668 FunFam Plasma membrane ATPase 486 641 - -
Eupl09g00729 668 SUPERFAMILY Calcium ATPase, transduction domain A 138 235 IPR008250 -
Eupl09g00729 668 Gene3D - 347 494 IPR023299 GO:0000166
Eupl09g00729 668 Pfam Cation transporter/ATPase, N-terminus 24 87 IPR004014 -
Eupl09g00729 668 NCBIfam plasma-membrane proton-efflux P-type ATPase 40 658 IPR006534 GO:0008553|GO:0016020|GO:0120029
Eupl09g00729 668 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Eupl09g00729 668 Pfam haloacid dehalogenase-like hydrolase 331 607 - -
Eupl09g00729 668 NCBIfam HAD-IC family P-type ATPase 107 356 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 NCBIfam HAD-IC family P-type ATPase 568 665 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl09g00729 668 SFLD Haloacid Dehalogenase 317 645 - -
Eupl09g00729 668 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 667 IPR023298 -
Eupl09g00729 668 FunFam Plasma membrane ATPase 138 222 - -
Eupl09g00729 668 Gene3D - 100 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00729 Eupl-Chr9 16247314 16256041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00729 1 665 Primary Pumps ATPases AT1G17260 82.707 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00729 K01535 - mof:131165857 1211.82