Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00718 ATGGAAGAAGAGATGATGCAGCAACTCAGATTCAAAGCTGCTGAGTTTCTTTTAAGAGAGGAATGGAAGGACTCCATCAATGTCTACTCTCAGTTCATCTCTCTCTGTCAAGAACAGCTCTCAAAGATCCATGAAAAGTCTGCCGCAAATCAAATCGCCAAGCTCCACAAATCCCTTTGTTTAGCCTTCTCGAATCGAGCCGAGGGACGATTCCGACTTAGAGAGTTCTCCGATGCTTTGGAGGATTGTGATCTAGCGCTGAAAATAGATTGTACCCATTTCAAGACTCTACTCTGCAAAAGTAAAATATTGCTCAATCTCAATCGGTACTCAATTGCTTCAGATTGCTTCAAACGAGCTTTCCTTGATCTTCAGACCAGTGGGAACTCTGAAATCCTTCTTGGGTATTTAAATAAGTGCAGGAAACTTGAGTTTCAGTCGAGGACTGGGGCTTTCGATCTTTCGGACTGGGTCTTAAATGGGTTTCGAGGAAAATCTCCGGAACTTGCAGAATACATAGGTTCAATCCAGATTAAGAAATCTGATTATGGCGGTCGTGGGCTATTTGCGACGAAGAACATCGAATCTGGGACTTTGTTGCTAGTCACCAAAGCAGTTGCCACTGACAGGGGTATATTGCCGGAACTCGGTGAAGATTTGGATGAGAGTGCTAAATTGGTTCTGTGGAAGGACTTCATAGATAAAGTTCTCGACGCTGCAACAAAATGCAGCAGAACTCATAATTTGATTTGTATGTTATCAACTGGAGAAGATGAAGACGACCTCCAAGTTCCTGATATAAGTCTCTTTAGGCCTGAAACTGAGTGCTGCTTTTCCAAGGAGAAGCCTGAAATTGGTAGGATCCTAAGCATATTGGATGTGAATTCTCTAATCGAGGACTCGATTTCAGCAAAAGTCCTTGGAAAGAAGTGTGATAATTATGATTACTATGGTGTTGGGCTATGGATTTTGGCTGGCTTCATCAATCACTCTTGCAATCCTACTGCAAGACGCTCGCATACTGGAGATCATGTGATAGTTTGTGCTTCTAGAGACATCAAGGAAGGGGAAGAGATCACATTCGCCTACGTTGATGTACTTCTGCCATTTAAGAAGCGAAGGGTGATTTCTAAGACATGGGGATTTTTATTGTAA 1155 0.426 MEEEMMQQLRFKAAEFLLREEWKDSINVYSQFISLCQEQLSKIHEKSAANQIAKLHKSLCLAFSNRAEGRFRLREFSDALEDCDLALKIDCTHFKTLLCKSKILLNLNRYSIASDCFKRAFLDLQTSGNSEILLGYLNKCRKLEFQSRTGAFDLSDWVLNGFRGKSPELAEYIGSIQIKKSDYGGRGLFATKNIESGTLLLVTKAVATDRGILPELGEDLDESAKLVLWKDFIDKVLDAATKCSRTHNLICMLSTGEDEDDLQVPDISLFRPETECCFSKEKPEIGRILSILDVNSLIEDSISAKVLGKKCDNYDYYGVGLWILAGFINHSCNPTARRSHTGDHVIVCASRDIKEGEEITFAYVDVLLPFKKRRVISKTWGFLL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00718 384 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 3 382 - -
Eupl09g00718 384 SUPERFAMILY SET domain 175 368 IPR046341 -
Eupl09g00718 384 SMART set_7 174 370 IPR001214 GO:0005515
Eupl09g00718 384 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Eupl09g00718 384 CDD SET_SMYD 311 382 - -
Eupl09g00718 384 Pfam SET domain 185 363 IPR001214 GO:0005515
Eupl09g00718 384 Gene3D SET domain 274 383 IPR046341 -
Eupl09g00718 384 Gene3D Tetratricopeptide repeat domain 2 149 IPR011990 GO:0005515
Eupl09g00718 384 ProSiteProfiles SET domain profile. 174 364 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00718 Eupl-Chr9 16102746 16103900 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl09g00718 SET 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00718 - - nnu:104597947 538.11