Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00712 ATGGCTCCTCATCCAGTAAAGATGTCGCACCCCACCATTATCTTCCTCTTCTTTTGCTTATTTTCTTTCTTAACTCTTGTTGCTCCCTGTGATTTGCTCCAAACGGACTGCTTCACGGCTCCCTCTTCGGTTCTGTTATCGTCTGTTAAGTCAACAATTGAGGAAGTAAGTAAGGTAACATCTATTGTCTCCCAATTCGCTAATGTATTCGACGACTTACGGCTATCGAATGCGATAAACGACTGTGTCGATTTGCTCGATTACTCGGCCGATGAGTTGAGTTTGACGCTTTCGGCCATGGAGAATCCCAATGGTAAGGATAACAGCACCGGCAATCAGAGATCCGACCTGAGCGCCTGGTTGAGCGCTGCACTTGGAAATCAAGATACATGCAATGATGGATTCGAAGGTACCGATAGTTTCGTTAAGGATACCGTCACAGGAAGTGTCCAACAAATAACGTCGCTAGTCGCAGACATTCTTAGCATGGTTCATCAAATTCCGTCTAACAAGTCTTCCAGTGATCACACTACTGGGAGGAAGCTTAGGAGTGGTAATTTTCCATTTTGGGTGAAACCCAGAGACCGGAGGCTCTTGCAAGCTCCGTCAAATGGGGTATCGGTAGATGTAGTCGTCGCCGCGGACGGGTCGGGAAAGTATACTAGTGTAATGGATGCGGTATTAGCTGCTCCTGATCATAGTATGACCCGGTACGTGATATATGTTAAGAGAGGTGTTTATAAAGAGAATGTGGAGATCAAGAAGAAGAAATGGAATTTGATGATGATCGGAGATGGGATGGACGTTACCGTTATTTCTGGTAATCGGAGTTTCATTGACGGTTGGACCACCTTCAGGTCAGCAACATTCGTGGTTGGTAGTTGA 885 0.4576 MAPHPVKMSHPTIIFLFFCLFSFLTLVAPCDLLQTDCFTAPSSVLLSSVKSTIEEVSKVTSIVSQFANVFDDLRLSNAINDCVDLLDYSADELSLTLSAMENPNGKDNSTGNQRSDLSAWLSAALGNQDTCNDGFEGTDSFVKDTVTGSVQQITSLVADILSMVHQIPSNKSSSDHTTGRKLRSGNFPFWVKPRDRRLLQAPSNGVSVDVVVAADGSGKYTSVMDAVLAAPDHSMTRYVIYVKRGVYKENVEIKKKKWNLMMIGDGMDVTVISGNRSFIDGWTTFRSATFVVGS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00712 294 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 168 IPR035513 -
Eupl09g00712 294 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Eupl09g00712 294 Pfam Pectinesterase 209 292 IPR000070 GO:0030599|GO:0042545
Eupl09g00712 294 SUPERFAMILY Pectin lyase-like 206 292 IPR011050 -
Eupl09g00712 294 Gene3D - 204 294 IPR012334 -
Eupl09g00712 294 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 169 IPR035513 -
Eupl09g00712 294 Pfam Plant invertase/pectin methylesterase inhibitor 43 156 IPR006501 GO:0004857
Eupl09g00712 294 CDD PMEI-like_4 52 168 - -
Eupl09g00712 294 NCBIfam pectinesterase inhibitor domain 41 165 IPR006501 GO:0004857
Eupl09g00712 294 PANTHER PECTINESTERASE 37 292 - -
Eupl09g00712 294 SMART PMEI_2 28 163 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00712 Eupl-Chr9 15963364 15966136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00712 12 292 Carbohydrate Esterase AT3G43270 53.287 4.51e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00712 K01051 - nnu:104609248 343.584