LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl09g00712	ATGGCTCCTCATCCAGTAAAGATGTCGCACCCCACCATTATCTTCCTCTTCTTTTGCTTATTTTCTTTCTTAACTCTTGTTGCTCCCTGTGATTTGCTCCAAACGGACTGCTTCACGGCTCCCTCTTCGGTTCTGTTATCGTCTGTTAAGTCAACAATTGAGGAAGTAAGTAAGGTAACATCTATTGTCTCCCAATTCGCTAATGTATTCGACGACTTACGGCTATCGAATGCGATAAACGACTGTGTCGATTTGCTCGATTACTCGGCCGATGAGTTGAGTTTGACGCTTTCGGCCATGGAGAATCCCAATGGTAAGGATAACAGCACCGGCAATCAGAGATCCGACCTGAGCGCCTGGTTGAGCGCTGCACTTGGAAATCAAGATACATGCAATGATGGATTCGAAGGTACCGATAGTTTCGTTAAGGATACCGTCACAGGAAGTGTCCAACAAATAACGTCGCTAGTCGCAGACATTCTTAGCATGGTTCATCAAATTCCGTCTAACAAGTCTTCCAGTGATCACACTACTGGGAGGAAGCTTAGGAGTGGTAATTTTCCATTTTGGGTGAAACCCAGAGACCGGAGGCTCTTGCAAGCTCCGTCAAATGGGGTATCGGTAGATGTAGTCGTCGCCGCGGACGGGTCGGGAAAGTATACTAGTGTAATGGATGCGGTATTAGCTGCTCCTGATCATAGTATGACCCGGTACGTGATATATGTTAAGAGAGGTGTTTATAAAGAGAATGTGGAGATCAAGAAGAAGAAATGGAATTTGATGATGATCGGAGATGGGATGGACGTTACCGTTATTTCTGGTAATCGGAGTTTCATTGACGGTTGGACCACCTTCAGGTCAGCAACATTCGTGGTTGGTAGTTGA	885	0.4576	MAPHPVKMSHPTIIFLFFCLFSFLTLVAPCDLLQTDCFTAPSSVLLSSVKSTIEEVSKVTSIVSQFANVFDDLRLSNAINDCVDLLDYSADELSLTLSAMENPNGKDNSTGNQRSDLSAWLSAALGNQDTCNDGFEGTDSFVKDTVTGSVQQITSLVADILSMVHQIPSNKSSSDHTTGRKLRSGNFPFWVKPRDRRLLQAPSNGVSVDVVVAADGSGKYTSVMDAVLAAPDHSMTRYVIYVKRGVYKENVEIKKKKWNLMMIGDGMDVTVISGNRSFIDGWTTFRSATFVVGS*	295

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl09g00712	294	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	40	168	IPR035513	-
	Eupl09g00712	294	ProSitePatterns	Pectinesterase signature 1.	234	253	IPR018040	-
	Eupl09g00712	294	Pfam	Pectinesterase	209	292	IPR000070	GO:0030599\|GO:0042545
	Eupl09g00712	294	SUPERFAMILY	Pectin lyase-like	206	292	IPR011050	-
	Eupl09g00712	294	Gene3D	-	204	294	IPR012334	-
	Eupl09g00712	294	Gene3D	Invertase/pectin methylesterase inhibitor family protein	31	169	IPR035513	-
	Eupl09g00712	294	Pfam	Plant invertase/pectin methylesterase inhibitor	43	156	IPR006501	GO:0004857
	Eupl09g00712	294	CDD	PMEI-like_4	52	168	-	-
	Eupl09g00712	294	NCBIfam	pectinesterase inhibitor domain	41	165	IPR006501	GO:0004857
	Eupl09g00712	294	PANTHER	PECTINESTERASE	37	292	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl09g00712	Eupl-Chr9	15963364	15966136	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl09g00712	12	292	Carbohydrate Esterase	AT3G43270	53.287	4.51e-97	293

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl09g00712	K01051		-	nnu:104609248	343.584

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