Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00710 ATGCCGTTAACTCTCTCTCTCTTTCTCCTACTCTCTCTTCTATCCTTCCTAACGCCTCCCTTACTCGCGGTCACGTCTCCGTCACTAACGCCGTCTCCTTCCGCCGCATGCAAGTCCACGCTCTACCCAAAGCTCTGCCGTTCGATCCTGTCGACATTTCGTTCTTCACCGTCTGATCCGTATGACTACGGCAAGTTTTCAGTCAAGGAGTGTATGAAACTAACGAAGAAGACTTCGCAGCTCATCAACCGGTTTCTGACCCACAAGCAACGGTCCTCGTTGAGCCATGCTGAGGCAGGAGCGCTCGAGGATTGTCGCCAGCTATCCGAGCTCAGCATGGACTACTTGAGCACCATCTCGAACGAGCTCAACTCGGCCGAGTCATTGTCACAAGTACTCGTTGATCGTGTGCAAACTCTGTTGAGTGCGATTGTGACGAACCAGCAGACATGCTTCGACGGTCTAGAAGATGCTGGAAGCAGCATGTTGGGTGCGTTGTACGCACCCTTCTCTAATGCCACTGAGTTGTATAGCGTCTCGCTCGGGTTGGTGACTCATTCCTTAGTTCGGAGTAAGCACAAGAGAAGAAGAAAATCGCCCGGAGAACGGGGTCTGACTAACGTAAACCGCGAATGGCGAACCGGGTTCGGCTCTGGTCGAGAGTCTAAATGGCCTAGGAGGACATCGATTGGATTCCCGGCGACCAGTCGGAATCTTGCAGAAGAAATGGATGATGGGATTCTAGTGAACAACACTGTAATAGTTACCAATGACGGGAGCGGGAATTTCACGACAATTGGAGATGCGGTCGCGTTTGTGCCAAACAATACATTGGCTGCAGATGGGTATTTTGTGATTTATGTTAAGGAAGGATTATATGACGAGTATGTTATTGTGCCGAAAAATAAGAAGAATATAATGTTACTTGGGGATGGCATTAATCGAACGGTAATTACCGGTAATCGAAGCTTTGTCGATGGCTGGACGACCTATAACTCAGCAACATTCGGTGAGTTACTAACATGTCGAATCAATTCTAGACCGAGTCGACTCAACCCGGTCGAGTTTGAGTTATAA 1077 0.4903 MPLTLSLFLLLSLLSFLTPPLLAVTSPSLTPSPSAACKSTLYPKLCRSILSTFRSSPSDPYDYGKFSVKECMKLTKKTSQLINRFLTHKQRSSLSHAEAGALEDCRQLSELSMDYLSTISNELNSAESLSQVLVDRVQTLLSAIVTNQQTCFDGLEDAGSSMLGALYAPFSNATELYSVSLGLVTHSLVRSKHKRRRKSPGERGLTNVNREWRTGFGSGRESKWPRRTSIGFPATSRNLAEEMDDGILVNNTVIVTNDGSGNFTTIGDAVAFVPNNTLAADGYFVIYVKEGLYDEYVIVPKNKKNIMLLGDGINRTVITGNRSFVDGWTTYNSATFGELLTCRINSRPSRLNPVEFEL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00710 358 Pfam Plant invertase/pectin methylesterase inhibitor 34 182 IPR006501 GO:0004857
Eupl09g00710 358 NCBIfam pectinesterase inhibitor domain 1 160 IPR006501 GO:0004857
Eupl09g00710 358 CDD PMEI-like_3 35 186 - -
Eupl09g00710 358 SMART PMEI_2 28 183 IPR006501 GO:0004857
Eupl09g00710 358 Gene3D - 247 346 IPR012334 -
Eupl09g00710 358 PANTHER PECTINESTERASE 18 337 - -
Eupl09g00710 358 SUPERFAMILY Pectin lyase-like 248 336 IPR011050 -
Eupl09g00710 358 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 187 IPR035513 -
Eupl09g00710 358 FunFam Pectinesterase 34 186 - -
Eupl09g00710 358 Pfam Pectinesterase 253 337 IPR000070 GO:0030599|GO:0042545
Eupl09g00710 358 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00710 Eupl-Chr9 15946667 15949550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00710 36 337 Carbohydrate Esterase AT3G10720 50.000 6.00e-91 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00710 K01051 - nnu:104609251 430.254