Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00709 ATGGCGTTTCAGGATTACGGTCATTTATCGGAACGCCTCAAGGCTGAAAAGCAACAGAAGCTAAGAAAAAAGATCACCATTACTTTAATTTTTTTCTTCGTCTTCTTTATCCTATTAGTATCTGGCATTTTAGCCATCGTTCATCGGTCGGGGAATGCCGTCTACGCAAAGAGCTCTGATACTCAACCAACAAAACAAATTTCACACTTGCAAAAGGGGATTAAGATGATATGTTCACCTACAGATTACAAACAAACTTGCGAGTCAAGCTTGTCGAAGGTAATGGGCTCCAATTCCTCTTCTCACTTTAAGGATCTTCTCAAGGCTGCAATTTTTGTGATCATCGACGAGGTCGACAAGGGCTTCAAGCACTCGATCAATTTAGAAATTGACAACCCGGATGTCAAAGGGGCTATCGACGATTGTCGGGTTCTTCTTCGTGATGCAAAAGAAGAACTTAAGGCCTCGGTTTCTCATGTCGGTGCTCACGATCTTGGGAAGCTTACCTCGAAAACCCATGACCTGAATAGTTGGCTAAGTGCCGTAATGTCATACCAACAAACATGTATCGACGGGTTCCCGGAAGGGAATTTGAAATCAAGGATGCAAAAGGGCATGAAGACTGCAAAGGAATTGACTAGTAACGCTCTTGCTATAGTCTCGGAAGTGTCGTCGTTCATTTCGTTTCTCCAGGTACCAGGATTCAACCATCGTCGCCTTCTATCGAATGAATCAGATGGGGTCTCTCTTCGTGAGGATGGTTTCCCTAACTGGATGACCCATGAAGATCGGAGGATGCTGAAGGCAAATCCTACCAAATTGAAGCCTAATGTTGTGGTGGCGAAAGACGGTAGCGGAAATTTTAGTACCATTTCTGAGTCGTTGGCTGCCATGCCTAAGGAATACAAAGGACGATACGTTATTTATGTGAAGGAAGGAATTTATGAGGAAACCGTGACAGTGGAGAAGAAGATGGTGAACGTTACCATGTACGGAGATGGATCGAGGAAGACGATTGTCACTGGGAGCAAAAATTTTGTGGATGGAGTTCGGACTTTTCAGACGGCAACATTTGTTAAATGGGTGGTTGAGATTGAAAGATGA 1104 0.4384 MAFQDYGHLSERLKAEKQQKLRKKITITLIFFFVFFILLVSGILAIVHRSGNAVYAKSSDTQPTKQISHLQKGIKMICSPTDYKQTCESSLSKVMGSNSSSHFKDLLKAAIFVIIDEVDKGFKHSINLEIDNPDVKGAIDDCRVLLRDAKEELKASVSHVGAHDLGKLTSKTHDLNSWLSAVMSYQQTCIDGFPEGNLKSRMQKGMKTAKELTSNALAIVSEVSSFISFLQVPGFNHRRLLSNESDGVSLREDGFPNWMTHEDRRMLKANPTKLKPNVVVAKDGSGNFSTISESLAAMPKEYKGRYVIYVKEGIYEETVTVEKKMVNVTMYGDGSRKTIVTGSKNFVDGVRTFQTATFVKWVVEIER* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00709 367 NCBIfam pectinesterase inhibitor domain 68 222 IPR006501 GO:0004857
Eupl09g00709 367 Pfam Plant invertase/pectin methylesterase inhibitor 74 219 IPR006501 GO:0004857
Eupl09g00709 367 Pfam Pectinesterase 277 359 IPR000070 GO:0030599|GO:0042545
Eupl09g00709 367 SMART PMEI_2 69 219 IPR006501 GO:0004857
Eupl09g00709 367 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 223 IPR035513 -
Eupl09g00709 367 Gene3D - 271 362 IPR012334 -
Eupl09g00709 367 FunFam Pectinesterase 70 224 - -
Eupl09g00709 367 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 223 IPR035513 -
Eupl09g00709 367 PANTHER PECTINESTERASE 37 359 - -
Eupl09g00709 367 SUPERFAMILY Pectin lyase-like 275 359 IPR011050 -
Eupl09g00709 367 CDD PMEI-like_3 77 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00709 Eupl-Chr9 15940972 15943251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00709 1 359 Carbohydrate Esterase AT4G33230 40.731 3.58e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00709 - - psom:113326769 439.499