Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00708 ATGTCTTTCTTAAAAGCCTATGGGAAAGTCAACGAAGCTGACCAAGAGAAACTCGAAGCTCGCCGGAGAACAAGAAAGAGAATCATCATCATAAGCTTGTCCTCGATCGTTCTCGTCGCAATTATCGTCGCGGCGGTTGTCGGAAGTTCTTTTGGCTCTGATGGAAAATCGAAATCCTCCGCCAACGCCGATGCCAGGAAATCGGTCACGACTTCCATCAAAGCTGTGTGCAAGGTCACCTTGTACCCCGGTTCATGTTACAATAGCCTCTCTTCAGTGGTGAATACATCCAATGTAGAACCAGAAGAGCTCTTCAAGTTATCCATCCAAATTGCGATTTCCGAATTATCGAAAGCCTCCGAGCAAATCTCAGAATACAAATTCAATGGGATTAACGATCCAATGTCGATTGAAGCTTTCGAGAATTGCCGGGATCTTCTCGTTCTCTCTATTGATCATCTCAATAGTACATTGTCATCTGCTGATATCACATTGCTTGAAGCTGTTGATGATCTTAAAACATGGCTAAGCGCAGCCGGGACATACCAACAGACATGCATCGATGGGTTCGAGAATGGGAGCGGAGAAATAAGGACTATAGTTTCCGAGTATCTTAAGAATTCAACTGAGTTCACTAGCAATAGCCTTGCGATTATCACCGGGATTTCCGACATCATAAGTTCTTTCAAGCTACGTCGATTGATGAGTTATACTCCTAGCAAATCACCAAAGTGGTTACGATCGAAAGACCGGAAGCTAATCGAGAGTTCGGAACTAAGAAAAAAGGCTGATGCAGTAGTGGCTCTCGATGGCTCTGGGAAGTACAAGACCATCATGGCAGCCCTTAAGGCGGTACCGGAGAAGAGCAAGAAGAGGTTCGTGATCTATGTGAAGAAGGGGGTCTACTATGAGAACGTTAAGGTTGAGAAGAAGAAATGGAACGTTTTGATGGTTGGTGATGGCATGGATGCTACAGTTGTGTCTGGTAAACTCAATTTTGTCGATGGGACTCCTACATTCTCAACTGCAACATTTGGCATTCATGATCAGGGTTTATGGGGTTTTGAAGCATTGTTTTTGATTGATTGA 1089 0.4417 MSFLKAYGKVNEADQEKLEARRRTRKRIIIISLSSIVLVAIIVAAVVGSSFGSDGKSKSSANADARKSVTTSIKAVCKVTLYPGSCYNSLSSVVNTSNVEPEELFKLSIQIAISELSKASEQISEYKFNGINDPMSIEAFENCRDLLVLSIDHLNSTLSSADITLLEAVDDLKTWLSAAGTYQQTCIDGFENGSGEIRTIVSEYLKNSTEFTSNSLAIITGISDIISSFKLRRLMSYTPSKSPKWLRSKDRKLIESSELRKKADAVVALDGSGKYKTIMAALKAVPEKSKKRFVIYVKKGVYYENVKVEKKKWNVLMVGDGMDATVVSGKLNFVDGTPTFSTATFGIHDQGLWGFEALFLID* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00708 362 FunFam Pectinesterase 69 223 - -
Eupl09g00708 362 SUPERFAMILY Pectin lyase-like 262 351 IPR011050 -
Eupl09g00708 362 Gene3D - 259 356 IPR012334 -
Eupl09g00708 362 SMART PMEI_2 68 218 IPR006501 GO:0004857
Eupl09g00708 362 Pfam Plant invertase/pectin methylesterase inhibitor 72 218 IPR006501 GO:0004857
Eupl09g00708 362 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 222 IPR035513 -
Eupl09g00708 362 Pfam Pectinesterase 264 351 IPR000070 GO:0030599|GO:0042545
Eupl09g00708 362 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 223 IPR035513 -
Eupl09g00708 362 NCBIfam pectinesterase inhibitor domain 59 221 IPR006501 GO:0004857
Eupl09g00708 362 CDD PMEI-like_3 75 223 - -
Eupl09g00708 362 PANTHER PECTINESTERASE 34 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00708 Eupl-Chr9 15937762 15940071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00708 7 360 Carbohydrate Esterase AT3G10710 48.056 3.81e-105 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00708 - - vvi:100267782 361.688