Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00707 ATGGATTCTATCAACTCCTTCAAGGGCTACGGTAAAGTAGACGAGCACGAAGAACGCGCATTTCGACGCAAGACACGAAAGCGTCTGATCATCATCGTTGTCTCTACGATCGTCTTAGCAGCGGTGATCATCGGTGTAGTCGCTGGAGCTTTGATACACAAGAACCACACTGAATCTAATGAGACTGGGAACCCATCGACGAGTCCAGCTGAGTCAATCAGAGCCGTCTGTAGCGTGACTCAGTACCCCAAATCATGTTTTTCCAGCATCTCTTCTCTCGAAAATTCCAACAAAGCTGACCCAGAAAATCTGTTCAAGCTCTCTCTGCAAATCGCCATTGAAGAGCTCTCCAACCTTTCTTCATTGCCTGACAAGCTTATCGCCAAGACCAATGATTCTCGGATCAAATACGCTTTGAAAGATTGTAAGGACCTTTTTGATGACGCCATTGATCAACTCAACACAACAATCTCGTCGACGCATGGGTTATCAACATCAAAGATCAACGACCTCAAGACGTGGCTTAGCAGCGCCGTCACCGATCAGGATACCTGTTTGGACGGCTTAGAAATGATCAACGCCACTCTCTTTAAAGATTTGAAAACAGCGATGCAGAATTCTACAGAGTTCACGAGTAACAGTTTAGCCATTGTTGCTAAGGTCTTATCAGTTCTTGAGAGTTTCGACACTCCGATTCATCGGAAGTTACTTGGGTTTGATTCTGAGTTTCCCGAGTGGGTCCACCCTAGGGATCGAAGATTACTTCAGGAAAATAATTCCACACCCGATCTAACGGTTGCGAAGGACGGTAGTGGGAACTATAAGACGATCAGAGAAGCAGTGGATGCTGTTCCGATGAAGAAAGACACCAGATTTGTGATCTACGTTAAAGCAGGCGAGTATCTAGAGAATGTGATTATAGATAAAGCACACTGGAACATCATGATGTACGGTGATGGGAAGGATAAGACGATCGTGTCCGGTAATTTGAACTTCGTTGATGGGACCCCCACGTTCTCCACAGCCACCTTCGAAAGGGACATGGCTACATGTGAAGCCTACCACATGTTGGCTCTCTTCTTGATGATCGTCTTCTTCGCCAGACCGGCCGATTCTGCGAGGCTGTATGCCATATCTGATGGTGGAAATTTGGTTTCGGTTACGTGCAATAGCACCCTATACTTTGATGTGTGTGTATCATCCTTGGAATCGGATCCTCGAAGTCGTACTGCTGATCGAGAAGGACTTGCAGGAATTGCTTTGGACATAAGCATCACTTATGGTATGGAGATAATCTCCCGTGTCAATGAACTCAAGTCTCAGGCCAATAGTACTGGCAATACCTACATGTCTACGTGTTTGAACAACTGCGTCGATGAATACTCTGATGCCATTGGAAATCTCCAGGACTCGGCCGAGGATCTCAAGAAGAAGTCTTATGGCACGGTGAATACATTGGTGACGGCGGCGATGACGGATTCCGATACATGCGAGGATGGGTTCAATGATATGTCGGGGTACAAATCACCCCTGACTAAGAGGAACCAAAAATTCTCTATGTTGTGTAGCAATGCCCTGGCAATTACCAATCTTCTTGTTTGA 1602 0.4607 MDSINSFKGYGKVDEHEERAFRRKTRKRLIIIVVSTIVLAAVIIGVVAGALIHKNHTESNETGNPSTSPAESIRAVCSVTQYPKSCFSSISSLENSNKADPENLFKLSLQIAIEELSNLSSLPDKLIAKTNDSRIKYALKDCKDLFDDAIDQLNTTISSTHGLSTSKINDLKTWLSSAVTDQDTCLDGLEMINATLFKDLKTAMQNSTEFTSNSLAIVAKVLSVLESFDTPIHRKLLGFDSEFPEWVHPRDRRLLQENNSTPDLTVAKDGSGNYKTIREAVDAVPMKKDTRFVIYVKAGEYLENVIIDKAHWNIMMYGDGKDKTIVSGNLNFVDGTPTFSTATFERDMATCEAYHMLALFLMIVFFARPADSARLYAISDGGNLVSVTCNSTLYFDVCVSSLESDPRSRTADREGLAGIALDISITYGMEIISRVNELKSQANSTGNTYMSTCLNNCVDEYSDAIGNLQDSAEDLKKKSYGTVNTLVTAAMTDSDTCEDGFNDMSGYKSPLTKRNQKFSMLCSNALAITNLLV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00707 533 NCBIfam pectinesterase inhibitor domain 355 532 IPR006501 GO:0004857
Eupl09g00707 533 NCBIfam pectinesterase inhibitor domain 65 220 IPR006501 GO:0004857
Eupl09g00707 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 381 533 IPR035513 -
Eupl09g00707 533 Gene3D - 257 359 IPR012334 -
Eupl09g00707 533 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 221 IPR035513 -
Eupl09g00707 533 CDD PMEI-like_3 75 220 - -
Eupl09g00707 533 Coils Coil 458 478 - -
Eupl09g00707 533 CDD PMEI-like_1 384 532 - -
Eupl09g00707 533 Pfam Plant invertase/pectin methylesterase inhibitor 384 528 IPR006501 GO:0004857
Eupl09g00707 533 Pfam Plant invertase/pectin methylesterase inhibitor 72 217 IPR006501 GO:0004857
Eupl09g00707 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 221 IPR035513 -
Eupl09g00707 533 SUPERFAMILY Pectin lyase-like 260 345 IPR011050 -
Eupl09g00707 533 SMART PMEI_2 380 528 IPR006501 GO:0004857
Eupl09g00707 533 SMART PMEI_2 68 217 IPR006501 GO:0004857
Eupl09g00707 533 Pfam Pectinesterase 263 346 IPR000070 GO:0030599|GO:0042545
Eupl09g00707 533 PANTHER PECTINESTERASE 364 529 - -
Eupl09g00707 533 FunFam Pectinesterase 69 222 - -
Eupl09g00707 533 FunFam Invertase/pectin methylesterase inhibitor family protein 381 532 - -
Eupl09g00707 533 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 383 532 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00707 Eupl-Chr9 15924687 15931069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00707 1 344 Carbohydrate Esterase AT1G53840 53.022 1.39e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00707 - - vvi:100232847 442.965