Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00688 ATGGACGAGTTTCTCGATCACTTCTTCCCATCCTCGTCATGGTCGGATGAAAATGTGTCAGAAAGGCCATCTTGGGTCGGCAATGGTCCTGCTCAAACAAATGGGCTACTCCCCGATTTGATGGGAGCATATGAGGGAGATGAAAGGAACTCACCATCAAGCTTAATTCCTTCTAGTCATATTATAGACAGCTTAGCCACGCAAGGTACTTCTCTGCTTGTTGGTGGGGATTCAAACTATGGTCTTGACAAGGGTTTACTTTCCAGAGAAGCCCGACCACAGCAAGAGGGTCCAGACTGTGAAAAAAAGCCTTCGTTGCCGGCACTGGTGGATGGTAACTCAAAAGCTGGCTACTTGGGTCTGCAGTTGATCACTTCTACATCAACCCTGGGCACATTGAATCATAGTCCTTCAGAGCTGCTTCCTGTTGTTGGTGGTTCGGCTAAGTCGCCTCTTGTGCCACCTGAATCTGGTTCTGTCGGAAGCAATGGTAGTGAACCATCAGGGTTCCAACCATCTCTTACAGTTTCTCACTCCCTTACTTCAATCCCGCAGTTATGGCCCCTACCGTCCTACAGGGGTGTTTCTTCCCTGTCTCCTCTTATGGGCCAAGATAAAATACAAGGCATTGGTTTGCAAGGAGAATATGTGGATACAGATGCTAATGTTTTGGGGAACAGATACCTTGGAGACGATAACATTCTGCAAATGAGCAATTTGCCTGCTTCAGTTTCTGCAAATGGGCAAGACGAACTGGAGAACCATTGTTTGTCCTCTTTCGCTGCTGGCCACCATATTTCTTTGGCAAGAACAGCTGGATTACATTCTCAGCCACAGTTGTCACAATTGAGTGAAGGAAATCCCATCAAGCATTATACGGACCAGTCTCCTGTTTCTCAGTTGCCACATGGACCTGCTACTGCTGGTGGTGGCTGTAATGGAGTTGTAAAGCCTCGTGTGAGAGCGCGCAGGGGTCAGGCCACTGACCCACACAGTATCGCTGAACGGCTTCGGAGAGAGAAAATTGCTGAGAGGATGAAGAATTTGCAAGAACTTGTTCCAAATTCTAATAAGACGGATAAGGCATCAATGCTTGATGAGATCATTGAATATGTCAAATTTCTTCAGCTTCAAGTCAAGGTTCTAAGCATGAGCAGGCTGGGGGCCGCAGGGGCTGTTGTACCCCTCATTACAGACGGTCAAGCTGAGGGCTCTAGTGGTCTACTTCTGTTGCCATCAGCTGGTCAGGGAGCTGATCTTTCAGAATCCCCAGACAACATTGCCTTTGAGCAAGAAGTGGTGAAGCTGATGGAATCCAATGTGACCACAGCCATGCAATATCTTCAGAGCAAAGGCCTCTGCCTCATGCCCATTGCCCTTGCAGCTGCCATTTCAAACAGGAAGGCTTCATCAGACCATGTTTCTGCTGAGAGAAACAAACCTGTCTTGATCCACGGCCTTGTTCCTCACAACAACAGCTTGCCTGGCGTTGGAACCCGGCAGATATCATCTGATGGCGAGATTGTAGGAAATGATAATGTGTCTGGGTTCTGTAACAGAGAAGACATCATCACAAGCAATGGTTGCAACGGGATCGTTATTAAACAAGAAGAGGAAAAAAATGCTTCATGCACTTCAAGAGAACTGAAACCCAAGGCATAG 1662 0.4747 MDEFLDHFFPSSSWSDENVSERPSWVGNGPAQTNGLLPDLMGAYEGDERNSPSSLIPSSHIIDSLATQGTSLLVGGDSNYGLDKGLLSREARPQQEGPDCEKKPSLPALVDGNSKAGYLGLQLITSTSTLGTLNHSPSELLPVVGGSAKSPLVPPESGSVGSNGSEPSGFQPSLTVSHSLTSIPQLWPLPSYRGVSSLSPLMGQDKIQGIGLQGEYVDTDANVLGNRYLGDDNILQMSNLPASVSANGQDELENHCLSSFAAGHHISLARTAGLHSQPQLSQLSEGNPIKHYTDQSPVSQLPHGPATAGGGCNGVVKPRVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNKTDKASMLDEIIEYVKFLQLQVKVLSMSRLGAAGAVVPLITDGQAEGSSGLLLLPSAGQGADLSESPDNIAFEQEVVKLMESNVTTAMQYLQSKGLCLMPIALAAAISNRKASSDHVSAERNKPVLIHGLVPHNNSLPGVGTRQISSDGEIVGNDNVSGFCNREDIITSNGCNGIVIKQEEEKNASCTSRELKPKA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00688 553 MobiDBLite consensus disorder prediction 11 31 - -
Eupl09g00688 553 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Eupl09g00688 553 MobiDBLite consensus disorder prediction 1 54 - -
Eupl09g00688 553 SMART finulus 332 381 IPR011598 GO:0046983
Eupl09g00688 553 MobiDBLite consensus disorder prediction 146 173 - -
Eupl09g00688 553 Gene3D - 323 390 IPR036638 GO:0046983
Eupl09g00688 553 Pfam Helix-loop-helix DNA-binding domain 331 376 IPR011598 GO:0046983
Eupl09g00688 553 FunFam Transcription factor bHLH66 323 388 - -
Eupl09g00688 553 MobiDBLite consensus disorder prediction 277 314 - -
Eupl09g00688 553 MobiDBLite consensus disorder prediction 156 173 - -
Eupl09g00688 553 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 163 462 - -
Eupl09g00688 553 MobiDBLite consensus disorder prediction 277 302 - -
Eupl09g00688 553 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 386 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00688 Eupl-Chr9 15711867 15721892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00688 317 466 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 67.308 3.86e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00688 HLH 8.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00688 - - nnu:104600465 665.611