Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00684 ATGGGTATAGATCTGGTCGCTGGAGGCAAGAGCAAGAAAACGAAGAGGACAGCACCGAAATCGGACGATATCTACCTTAAGCTTCTCGTTAAGCTGTACAGGTTTTTGGTTAGGAGGACTGGCAGTAAATTCAATGCTGTTATACTGAAGAGATTGTTCATGAGCAGGACAAATAAGCCACCACTATCGCTGTCTAGGTTGATTCAGTTCATGAAAGGGAAGGAAGATAAGATTGCTGTTGTTGTTGGCTGTGTTACTGATGATACCAGAGTTTATGAAGTACCAGCATTGAAGGTGACTGCTCTGAGGTTTACAGAGACGGCTAGGGCTAGAATTGAGAAAGCGGGAGGTGAATGCTTGACATTTGATCAACTTGCTCTCAGGGCACCTCTAGGGCAGGGCACGGTTCTTCTGAGGGGACCCAAGAATGCAAGAGAGGCAGTGAAGCACTTTGGCAAGGCTCCTGGTGTGCCCCACAGCCACACCAAGCCATATGTCCGTTCCAAGGGCCGAAAGTTCGAGAAAGCCCGAGGACGGAGGAACAGCCGTGGCTTCAGGAATTAA 564 0.4858 MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSRTNKPPLSLSRLIQFMKGKEDKIAVVVGCVTDDTRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQGTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFRN* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00684 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 187 IPR000039 GO:0003735|GO:0005840|GO:0006412
Eupl09g00684 187 MobiDBLite consensus disorder prediction 152 187 - -
Eupl09g00684 187 Gene3D - 1 187 - -
Eupl09g00684 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 186 IPR021131 -
Eupl09g00684 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Eupl09g00684 187 MobiDBLite consensus disorder prediction 164 187 - -
Eupl09g00684 187 FunFam 60S ribosomal protein L18 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00684 Eupl-Chr9 15665531 15669444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00684 3 186 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.838 6.99e-102 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00684 K02883 - nnu:104609266 332.798