Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00678 ATGGGGAGAGAACGAGAGGTTCAAAAGCAGCAGATCTCTTACACGGTCGAGCAGCTCGTCGCTGTGAATCCGTACAATCCAGACATTCTTCCTGACCTGGAAAGCCACGTGAATGAGCAGGTTTCATCGCTAACATACAGTTTGGATGCAAATCTATGCCTTCTTCGACTCTATCAGTTTGAACCAGAGCGGATGAGTACCCAGATCGTCGCCCGCATTTTGGTTAAGGCTCTTATGGCAATGCCAGCTCCAGATTTCAGTCTTTGTCTCTTCTTAATTCCAGAACGAGTGCAAATGGAGGAACAGTTCAAGACACTGATTGTTCTATCTCACTATCTGGAGACAGCAAGATTCCGCCAGTTTTGGGATGAGGCAGCGAAGAATCGCAGCATAGTTGAGGTCGTGCCAGGTTTTGAGCAAGCAATCCAGGCTTATGCAATCCATGTCCTGTCCTTGACGTATCAAAAGGTTACCAGGCCTGTACTTGCAGAGTCTATCAACGTTGAAGGCCTTTCCCTGGACAAGTTCTTAGAGCACCAGGTAGCCAACTGCGGTTGGGTTCTTGAGAAGGGCCATGGCCGGGGTCAGCTCATTGTCCTTCCTCGCAACGAGTTCAACCAGCCGGAGCTCAAGAAAAACACTGCAGATAGTATCCCGTTGGAGAACATTACTCGAATCTTCCCCATTCTTGGCTGA 696 0.4885 MGREREVQKQQISYTVEQLVAVNPYNPDILPDLESHVNEQVSSLTYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETARFRQFWDEAAKNRSIVEVVPGFEQAIQAYAIHVLSLTYQKVTRPVLAESINVEGLSLDKFLEHQVANCGWVLEKGHGRGQLIVLPRNEFNQPELKKNTADSIPLENITRIFPILG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00678 231 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 7 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Eupl09g00678 231 Gene3D - 127 229 IPR036388 -
Eupl09g00678 231 FunFam Eukaryotic translation initiation factor 3 subunit K 127 230 - -
Eupl09g00678 231 Pfam CSN8/PSMD8/EIF3K family 66 191 IPR033464 -
Eupl09g00678 231 Gene3D ARM repeat; domain 1 6 124 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Eupl09g00678 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 228 IPR009374 GO:0003743|GO:0005737|GO:0005852
Eupl09g00678 231 SUPERFAMILY ARM repeat 8 134 IPR016024 -
Eupl09g00678 231 FunFam Eukaryotic translation initiation factor 3 subunit K 8 124 - -
Eupl09g00678 231 SUPERFAMILY "Winged helix" DNA-binding domain 136 228 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00678 Eupl-Chr9 15596563 15601652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00678 1 231 Eukaryotic Initiation Factors Gene Family AT4G33250 74.892 6.98e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00678 K15028 - ming:122084099 429.098