Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00674 ATGGAGCCAAGTATCACCGTCAAGAACGCTGCTGAAACCTCCAAGAATCCATCCACAACTCGACAAAAGGCATGTGTGCTCGTCTTCCTCGCCCTCTTGACACTACTTCTTGTCGCTGCTGCAATTCTCAGAGAATCATCTCTCTACCATGAACGAGACCCGATCACCTCTGCAATTCTATCTCCACGTTCAATTGTCAAGAACACATGCTCCAAGACCCTCTACCCGTCTCTCTGTTTCACCACCCTCTCTTTGATCCCTGCCTCAATGACAGCCACCACCCGTGAACACATTCTTGAAATTGCGATCAAGCGGACTATAAAATCTGTCGAGAGCTCTCAGTCAAAGATTGCCAGTCTTCTCACCCTTCAAGATTTGAATTCACAGGAAAAGAATGCTATAAACGATTGCATGGAGATGTTGGATCAGACCCTTTATGAGCTTAGGCAAACCATAGAAGAACTTCAAGATTTTCCAGCGTTGACCTGCTCTGTTCGCCAATTCTACATTGAGCTCAAGACCCTTCTGAGTGCAGCCATGACGAATGAGAACACATGTATCACCGGAATCTCAGACGTCGAAGAAGCGGACCCAGAAAGTCAAAAGGGTCTTAAAGTATACCTCCAAAGTCTATTGACTCCAATTTCTCATATGATCAGCAATTGCCTAGCAATGGTCAAACACAGGGAGACTATCAGCCGAGAGAAGGCCGTCAATGGTCAAAAGAATGTAACTACAAGAATGCCCCCAGATGGGTTTCCAGTATGGATGACGTCCGGCGATCGGAAACTAATGGAGGTAGCTCCGGTGATATGGCCAAATATCATCGTTGCCAGTGATGGCAGTGGCAATTATCACACAATCAGTGAGGCAGTGAGGATGGCACCTAACATGAGCATGTACAGGTTCATCATCAAGATAAAGGCAGGGGTATACATGGAGAACGTAGAGATACCAAGGAAGAAGGCGAATATAATGTTGGTCGGAGACGGGATGCTTTCAACGGTGATCATTGGCTTCAAGAACTTCTTTGATGGGTTTTCGACCTTCAATTCAGCTACCTTAACTGTGATTGGAGACAGATTCATAGCTAGGGACCTAACCATTATCAACAAATCAGGTCCGGAGAAGCATCAGGCAGTCGCCCTTCGAGTGACCTCCAATTCTGCATTCTATAGGTGCAACATCACCTCGTATCAGGACACCCTTTATGCTCATTCTCTTCGCCAGTTCTACCGCGAATGCACAATCCAAGGCACGATCGATTTCATATTCGGAAATGCCGCTGCTGTCTTCCAGAACTGCCTTATTCTTGTCCGCAAACCGAACCCCGGTCAAAAGAACATGATCACAGCTCAGGGGAGAGAAGACCCAAATCAGAACACTGGCATCTCATTGCAGAATTGCACTATTGTTGCTGCACCAGACCTCATGGCAGCTGGGGCAGGCAGTTTTTCGACGTTCTTGGGTCGACCATGGAAGAACCATTCTAGGACAATGGTCATGAAGAGCTACTTCGGGAAACTCATACATCCTAGGGGGTGGCATAAATGGAATAAGTATAGCACATTAGACACTGTCGAGTACATTGAGTACATGAATGTCGGACCCGGTTCGGACACAAGACGTCGTGTTACATGGGGAGGGTACAAAAGGAATGTCAGTGAGGACATGGCTAAGCAGTTTACAGTGGGGGAGTTCTTGCATGGAGCTGATGATTGGTTAGAGTCCACTGGTTTTCCTTTCTTTTAA 1752 0.4675 MEPSITVKNAAETSKNPSTTRQKACVLVFLALLTLLLVAAAILRESSLYHERDPITSAILSPRSIVKNTCSKTLYPSLCFTTLSLIPASMTATTREHILEIAIKRTIKSVESSQSKIASLLTLQDLNSQEKNAINDCMEMLDQTLYELRQTIEELQDFPALTCSVRQFYIELKTLLSAAMTNENTCITGISDVEEADPESQKGLKVYLQSLLTPISHMISNCLAMVKHRETISREKAVNGQKNVTTRMPPDGFPVWMTSGDRKLMEVAPVIWPNIIVASDGSGNYHTISEAVRMAPNMSMYRFIIKIKAGVYMENVEIPRKKANIMLVGDGMLSTVIIGFKNFFDGFSTFNSATLTVIGDRFIARDLTIINKSGPEKHQAVALRVTSNSAFYRCNITSYQDTLYAHSLRQFYRECTIQGTIDFIFGNAAAVFQNCLILVRKPNPGQKNMITAQGREDPNQNTGISLQNCTIVAAPDLMAAGAGSFSTFLGRPWKNHSRTMVMKSYFGKLIHPRGWHKWNKYSTLDTVEYIEYMNVGPGSDTRRRVTWGGYKRNVSEDMAKQFTVGEFLHGADDWLESTGFPFF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00674 583 Pfam Plant invertase/pectin methylesterase inhibitor 65 225 IPR006501 GO:0004857
Eupl09g00674 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 228 IPR035513 -
Eupl09g00674 583 PANTHER PECTINESTERASE 36 576 - -
Eupl09g00674 583 FunFam Pectinesterase 269 583 - -
Eupl09g00674 583 Gene3D - 270 583 IPR012334 -
Eupl09g00674 583 NCBIfam pectinesterase inhibitor domain 50 227 IPR006501 GO:0004857
Eupl09g00674 583 FunFam Pectinesterase 62 230 - -
Eupl09g00674 583 SMART PMEI_2 61 225 IPR006501 GO:0004857
Eupl09g00674 583 Coils Coil 123 143 - -
Eupl09g00674 583 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Eupl09g00674 583 CDD PMEI-like_3 70 228 - -
Eupl09g00674 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 228 IPR035513 -
Eupl09g00674 583 SUPERFAMILY Pectin lyase-like 271 582 IPR011050 -
Eupl09g00674 583 Pfam Pectinesterase 274 570 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00674 Eupl-Chr9 15542537 15544858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00674 55 582 Carbohydrate Esterase AT1G53830 46.225 3.60e-164 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00674 K01051 - nnu:104609398 770.77