Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00667 ATGGATGCCGGACAAGCGAAAAACAGCGATTTTTACTCTGTTTTGGGGTTGAAGAAGGAATGCACTGCGAAGGAGCTCAGGAATGCGTATAAGAAGCTCGCACTGAGATGGCACCCAGATCGGTGTTCTGCTTCAGGAAACTCAAAGTCTATCGAAGAAGGAAAGAAAAAATTTCAGGCAATACAGGAGGCTTATTCTGTTCTTTCTGACGTGAATAAAAGATTTCTGTACGACGTTGGAATCTACGAGAGTGATGATGACGATGAGAACGGAATGGGTGATTTTTTGGGGGAAATGGCGGCAATGATGAGCCAAACAAAGCCCAGTGAGACGGGACAGGAGAGCTTCGAGGACCTTCAGGTGCTATTCGAGGAAATGTTCCAAAAGGACATGGAAGCTTTTAATTACACGTCTCAGTGCTCATCCTCAAACATCAACACCAACAACATGTTCTCATCTTATTCTTCGTCTTCGTCTAACAACAAGAGAAATTGCTCGGACATGAGCTCTGGAAAGGCCAAGGTGGAAGACGGCACAGAGGACTTGAAGGGGAGAGGTGGAAGCGGTAGGCGGAGGACCAGTAGGAATAAGAAGTTTTCCTCTCCGCACGATGTGTCCTCCCGTGATGCTAGCATTTCAGCTTAA 645 0.4651 MDAGQAKNSDFYSVLGLKKECTAKELRNAYKKLALRWHPDRCSASGNSKSIEEGKKKFQAIQEAYSVLSDVNKRFLYDVGIYESDDDDENGMGDFLGEMAAMMSQTKPSETGQESFEDLQVLFEEMFQKDMEAFNYTSQCSSSNINTNNMFSSYSSSSSNNKRNCSDMSSGKAKVEDGTEDLKGRGGSGRRRTSRNKKFSSPHDVSSRDASISA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00667 214 SUPERFAMILY Chaperone J-domain 7 87 IPR036869 -
Eupl09g00667 214 CDD DnaJ 10 70 IPR001623 -
Eupl09g00667 214 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Eupl09g00667 214 Pfam DnaJ domain 10 78 IPR001623 -
Eupl09g00667 214 PRINTS DnaJ domain signature 53 73 IPR001623 -
Eupl09g00667 214 PRINTS DnaJ domain signature 12 30 IPR001623 -
Eupl09g00667 214 PRINTS DnaJ domain signature 30 45 IPR001623 -
Eupl09g00667 214 MobiDBLite consensus disorder prediction 153 214 - -
Eupl09g00667 214 PANTHER PUTATIVE, EXPRESSED-RELATED 3 179 - -
Eupl09g00667 214 MobiDBLite consensus disorder prediction 169 188 - -
Eupl09g00667 214 Gene3D DnaJ domain 6 140 IPR036869 -
Eupl09g00667 214 MobiDBLite consensus disorder prediction 153 168 - -
Eupl09g00667 214 SMART dnaj_3 9 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00667 Eupl-Chr9 15475222 15479301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00667 12 78 C2H2 Transcription Factor Family AT1G74250 44.118 1.27e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00667 - - mof:131167111 246.514