Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00654 ATGCGAATTTTCTGTGTTGCTGATGGTGGGATCAGCTCGATGTTTGTCAGCAATTGGTTTGCATTCTCAAGCCATCTCCTTTCTAGGCATTGTTTGGGAAGCGTAACTATGGGCTCTTTTTGTTGCTGTCCATGTGGCGAGGAGTTTGAAGAATATGCTCATCCAAGTAGTTCCATATATAGGCACTGCATATGTCTAAGATACTTCCTCCATCAGCTATTCAGTGGGTCCAGTGCAATGTTTCACAGACTTGAAGGACGATCTGTTGCATCACCAATCCAAGGGCCTACTTCTTTGGCAACAACAGGGCTGGGCTCAACATTACCTGACAGCTCCTTAACTGAGACACACCACTTTGTCCCCAGACCAATGCCGTATGATGCTGATCAAAGGTATACCCGCTTGCAGCGTGATGGATTGGTCTTGAGGCGCGAAAAGTCTGTGAGCCATTTACAAGAAGAGTCACAACCACTTAGAAGAAGCAATAGTAGCTCTGGTGTAGAACCATTGGGTGCAGGGAGGAAGTGGAATGGAGTTGATTCTGAAGAAGAATGTAAAACTGGACGATCAGAGTCCTTAGAGAAGACTTCATCCGCAAAAGTTCCATATGGACTAGCTTATATGGTACCATCTTCTGAGGATGAAGATGTCTGCCCTACATGTCTGGATGAATATACTCCTGAAAATCCTAGGATCATCACGCAATGCTCCCATCATTTTCACCTCAGTTGTATATACGAATGGATGGAAAGAAGTGAAAGTTGTCCACTTTGCGGCAAGGAGATGGAGTTTTGCGAAAGCCCGTAA 807 0.4511 MRIFCVADGGISSMFVSNWFAFSSHLLSRHCLGSVTMGSFCCCPCGEEFEEYAHPSSSIYRHCICLRYFLHQLFSGSSAMFHRLEGRSVASPIQGPTSLATTGLGSTLPDSSLTETHHFVPRPMPYDADQRYTRLQRDGLVLRREKSVSHLQEESQPLRRSNSSSGVEPLGAGRKWNGVDSEEECKTGRSESLEKTSSAKVPYGLAYMVPSSEDEDVCPTCLDEYTPENPRIITQCSHHFHLSCIYEWMERSESCPLCGKEMEFCESP* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00654 268 MobiDBLite consensus disorder prediction 154 168 - -
Eupl09g00654 268 MobiDBLite consensus disorder prediction 146 197 - -
Eupl09g00654 268 FunFam RING/U-box superfamily protein 172 264 - -
Eupl09g00654 268 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 109 266 - -
Eupl09g00654 268 SMART ring_2 218 258 IPR001841 -
Eupl09g00654 268 CDD RING-H2_AIRP1-like 214 262 - -
Eupl09g00654 268 Pfam Ring finger domain 217 258 IPR001841 -
Eupl09g00654 268 SUPERFAMILY RING/U-box 213 263 - -
Eupl09g00654 268 MobiDBLite consensus disorder prediction 177 193 - -
Eupl09g00654 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 266 IPR013083 -
Eupl09g00654 268 ProSiteProfiles Zinc finger RING-type profile. 218 258 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00654 Eupl-Chr9 15287538 15290784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00654 37 268 C3H Transcription Factor Family AT5G15790 47.083 7.86e-63 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00654 - - nnu:104592732 384.03