Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00640 ATGGTGAAACCAACTACCGGAAAACCCTCTGAGAGAAGTGATTCCCGTTATACGGGTGTCAGAAAACGTAAATGGGGAAAATGGGTGTCAGAAATCCGGCTACCAAACAGTAGGGAACGTATATGGTTAGGATCTTACGACAAGCCGGAAAAGGCAGCTCGGGCTTTCGACGCCGCGCTTTTTTGTCTACGTGGCAAAGGGGCAAAGTTCAATTTCCCGGATAACCCACCAGAGATTGCCGGTGGGAGGTCCCTCACTCGCCCAGAAATCCAAGCTGCTGCAGCTAGGTTTGCGAACGAGGAGCCACCGAAAGATCGTTTGGACGGTCAGGAATTCACCTCGGAGTATCTTCGATCGCCCTCGTCAGTCTCTGATGGGACAATCCCAACAGAGAGTGATCCAACGATGGATTGGTCTTTATTCGATTTGGATATGACGACATTGTGCGGCGATAGTTTGTCAGATTTCAGTGCTTTTTCTGAGATCAACTATTTTCCCGACGAGTTTCTTCCGCCAGTAGCGGCCGGCGAGTTTCTTCCGCCAGTAGCGGAAGTTGATTTTGGGGAGGAAATTAACGATGGTGGGGTTTTTCCTCAACAGTCGTTCCTTTGGAATTTCTGA 621 0.496 MVKPTTGKPSERSDSRYTGVRKRKWGKWVSEIRLPNSRERIWLGSYDKPEKAARAFDAALFCLRGKGAKFNFPDNPPEIAGGRSLTRPEIQAAAARFANEEPPKDRLDGQEFTSEYLRSPSSVSDGTIPTESDPTMDWSLFDLDMTTLCGDSLSDFSAFSEINYFPDEFLPPVAAGEFLPPVAEVDFGEEINDGGVFPQQSFLWNF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00640 206 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Eupl09g00640 206 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Eupl09g00640 206 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Eupl09g00640 206 MobiDBLite consensus disorder prediction 1 22 - -
Eupl09g00640 206 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Eupl09g00640 206 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Eupl09g00640 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 143 - -
Eupl09g00640 206 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Eupl09g00640 206 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Eupl09g00640 206 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Eupl09g00640 206 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00640 Eupl-Chr9 15031651 15032730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00640 15 206 AP2-EREBP Transcription Factor Family AT1G19210 49.479 1.64e-51 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl09g00640 AP2 1.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00640 - - nnu:104609295 241.891