Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00635 ATGTCGATTTCGTCGGATTTCTCTGAAGCCGGGAGGTTTTCTGCCCGGAAAACAGTTGGATCGCTGGAGAAGTCGAATTTCTCGCAGACGTGTAATCTATTGAGTCAATATTTGAAGGAGAAAGGAAGTTTCAGAGATCTGAGCCTTGGAATAAGTTCCAATCTAGAAGTTAAAGGCAACCCGGAATCGTTTCTGCATACAACAACGACGATGAATTTCTTGCCGAGAGAAGCTTCGGGCATTTCGGAGCGACAAGCTGCGAGCTTGTCTCGTAACATGAAGTCCATGGATTTGTTTCCTCAACATGCCGGTTTTGGCCGATCCGATTCTACTGAAAACATCCCAAAGAAGGCTGATTTCAGGCCGGAAAACGCCCAAATGACGATATTTTATGCCGGAAGAGTAATTGTGTTGGACAATCTGTCAGCGGACAAGGCGAAGGAAGTCATGCTCTTAGCTAACAAGGCAAGCTCTCAGAATTCAAGCACCGATGGACAAAATTCCGGTGGCTTTGTGGCTTCTGGTACGAATTTTTCCGGGAATAATTCGACCCAGGAGCAGTTTCAACGACCTCCTCAAGCCAATGTATCAGATCTCCCAATTGCAAGGAAAGCATCACTTCACCGGTTCTTAGAGAAGAGAAAAGATAGGATTAGTGCAAAAGCACCATACCAACTAAACAACTCGGCTTCAGCTCCAGCCAAGCCAATGGAAAGCAAGGTCTGGCTCGGTTTGGCATCGCAATCGGCGAAGCCATTTGAGCTCCAATTGTAG 774 0.4651 MSISSDFSEAGRFSARKTVGSLEKSNFSQTCNLLSQYLKEKGSFRDLSLGISSNLEVKGNPESFLHTTTTMNFLPREASGISERQAASLSRNMKSMDLFPQHAGFGRSDSTENIPKKADFRPENAQMTIFYAGRVIVLDNLSADKAKEVMLLANKASSQNSSTDGQNSGGFVASGTNFSGNNSTQEQFQRPPQANVSDLPIARKASLHRFLEKRKDRISAKAPYQLNNSASAPAKPMESKVWLGLASQSAKPFELQL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00635 257 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 238 IPR040390 -
Eupl09g00635 257 SMART tify_2 120 155 IPR010399 -
Eupl09g00635 257 Pfam Jas motif 200 225 IPR018467 -
Eupl09g00635 257 MobiDBLite consensus disorder prediction 156 194 - -
Eupl09g00635 257 MobiDBLite consensus disorder prediction 156 199 - -
Eupl09g00635 257 Pfam tify domain 122 154 IPR010399 -
Eupl09g00635 257 ProSiteProfiles Tify domain profile. 120 155 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00635 Eupl-Chr9 14965679 14968464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00635 4 248 Tify Gene Family AT1G19180 39.768 1.80e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl09g00635 tify 2.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00635 K13464 - nnu:104600505 270.396