Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00625 ATGGCCGGTGGTAGAGTTGAGGTGGTAAACAGCAAGGGCTGTTCAAGACTGTTTGTCGGGTTTTCCTCATCGGTTCCTTCTTTCCGAAGCTTGCAATCAGTCGAGCCGATGTCTCCGGTTTCTTCCACTGTGTCTGAGTCCGTGGTTCAAGCCAGTGGTCCCTTCTCCGGTCTGGTCATATGTGTCACTGGACTATCCAAAGAAGCAAGGCAACAAGTCATGGCTGCAACAGAGAGATTGGGTGGTCAATACAGTCCCAATCTGCATCCTCAATGTACTCATCTAGTGGTCCAGAGCTCTGGTGGACGTAAATTTGAGCATGCTTTGAAGCATGGATTGAGAAATGGTCTCTTTGTTGTTACCTTGGGATGGTTTGTGGATAGTGTTAGAAGGAATGTGAGGTTGAGTGAATCACTTTACAGTGTTAAAAGTGTGGGAGAAAATGGTATGCCAGTGGAGATGAATCGGCTTGTTGGATTCACTGGCGCAGAGAAATCCTGTCTTCCTGTTGGTGTGCTAGAAGATACCAAACAAACAAACATGTCCCCGCAACCACATCTACGGTTTTCTGGAAACGAGTCTGTTAGGAGTCGGGAATTGGTTCTTGCCAGTCACTCCATATATGTTGATTCAGATATTTCTGTTGAACTGCAAAGTAAGGTTGTAGATGCAGCTTCTAAAGAAGGTGCTACATTTGTAGATCACTGGTTTGTTGGTTGTGGTGCAACTCATGTAGTATGTGAAGGGCCTTCTATCCAGAGATATCTAGGCCACACAAATAATCTTATTACCCCACTGTGGATTCTGAAAACCGCAAAGGAGAAATATGTGCAAAGACTCGTTCACTTATCTGCTGACCTAGCTAGGCAGGTGGGCATGATCCTAGAGAATTTTCATAATGGCATTGCTGGACAGGAAACTAATGGGACTGGTGGTTCTCAATATGCTCTGAACTCCGCGGAGCGTCTAACATCTGGGAAAAGTAGAGAAAGCCCTGAAGAGAGGCAACAGATTGTGAATTTGGCCAAAATCGGGGTTAGAAACCGTCGTGGTCGCCGTATGCAGACGTGCCAAACTCCAATACGTCCGATAACCCCAAGAAGCCTTCTGGATTCAATCTGTTGGTCAATATCTGAGCCAACTTCAGCTGCTTGTATTTATACAGACTCTTCCGGGTTCGACAATGTTAGCGAACAAAACACCTCTGTATTCTTTGACGCAAGAGGGGATGGAAAGGATTCAGAAGCCTCATTTGAAAACTTTTCCCGTCCTCTCAGAGAAAGTGAGAAATCAGAGATGATATTCAAAAGTCACTTTCTTACCATACTGTTCCCGATCGACCGATTTGGTGAGATGGGGCCTTCATCCAGAACGTTCTTCAGCAATAACGGTTTTACTTGTTTGCAGGTGTTAGATCATATCTATGCATTTTATCAGGAGAACATGTCAGAATATGAAGTGGATGCTGCTATTCACACCGACTCTAGGCACTCAGACCGGCTTCGAGTGGTCTATGCTAGTAAAGAATCAGTAGAAACTGGTATTGTGCAATTCAAACGAATCGATTTCCTGGGGAGTCGGAGAAGCTTTGAAATGCTGAAGCGTGTTAGCGGGGACAACAACAGCAATGCGTATGAACTGTTGATCAGAGCTTGA 1656 0.4517 MAGGRVEVVNSKGCSRLFVGFSSSVPSFRSLQSVEPMSPVSSTVSESVVQASGPFSGLVICVTGLSKEARQQVMAATERLGGQYSPNLHPQCTHLVVQSSGGRKFEHALKHGLRNGLFVVTLGWFVDSVRRNVRLSESLYSVKSVGENGMPVEMNRLVGFTGAEKSCLPVGVLEDTKQTNMSPQPHLRFSGNESVRSRELVLASHSIYVDSDISVELQSKVVDAASKEGATFVDHWFVGCGATHVVCEGPSIQRYLGHTNNLITPLWILKTAKEKYVQRLVHLSADLARQVGMILENFHNGIAGQETNGTGGSQYALNSAERLTSGKSRESPEERQQIVNLAKIGVRNRRGRRMQTCQTPIRPITPRSLLDSICWSISEPTSAACIYTDSSGFDNVSEQNTSVFFDARGDGKDSEASFENFSRPLRESEKSEMIFKSHFLTILFPIDRFGEMGPSSRTFFSNNGFTCLQVLDHIYAFYQENMSEYEVDAAIHTDSRHSDRLRVVYASKESVETGIVQFKRIDFLGSRRSFEMLKRVSGDNNSNAYELLIRA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00625 551 Gene3D BRCT domain 53 144 IPR036420 -
Eupl09g00625 551 CDD BRCT_TopBP1_rpt2_like 53 132 - -
Eupl09g00625 551 Pfam twin BRCT domain 58 114 IPR001357 -
Eupl09g00625 551 SMART BRCT_7 52 132 IPR001357 -
Eupl09g00625 551 SMART BRCT_7 199 275 IPR001357 -
Eupl09g00625 551 Pfam Family of unknown function (DUF6699) 461 535 IPR046522 -
Eupl09g00625 551 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 4 551 - -
Eupl09g00625 551 SUPERFAMILY BRCT domain 48 142 IPR036420 -
Eupl09g00625 551 ProSiteProfiles BRCT domain profile. 50 142 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00625 54 142 Core DNA Replication Machinery Family AT1G77320 38.202 3.12e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00625 - - nnu:104600519 848.966