Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00587 ATGAGTCTTCGAAGGGGCTCCAACGTCTGGTTAGAAGACAGAGATTCTGCCTGGGTGGCAGCCGAAGTTGTTGATGTTGCCGGTAAACAAGTTCGAGTTGTTACGGATTCGGGGAAGAAGGTCTTGGTTGCACCGGAGAAATTGTTACCGAGGGATCCTGACGCTGACCATGGCGGAGTGGATGACATGACGAAGTTAACGTATTTGAATGAGCCCGGAGTTCTTTATAACCTCGCAAGAAGATATGCACTGAACGATATATACACATACACAGGAAGCATCTTGATTGCTGTTAACCCATTTACAAAGCTTCCTCATCTATATAATGCACACATGATGGAGCAATATAAGGGAGCTCCTTTTGGCGAGCTAAGTCCACATGTTTTTGCCGTTGCGGATGCATCATACAGAGCAATGATGAATGAGGCTCGTAGTCAGTCTATTTTGGTCAGTGGAGAAAGTGGGGCTGGAAAAACAGAGACAACAAAACTGATTATGCAGTACCTAACTTATGTTGGTGGCCGAGCTGCTGGTGATGACCGAACAGTTGAGCAACAAGTCCTTGAATCAAATCCGCTCTTGGAGGCATTTGGTAATGCAAGGACTATTAGGAATGATAACTCAAGTCGTTTTGGCAAGTTTGTTGAGATCCAATTTGATGCTAACGGTAGGATATCTGGGGCTGCAATCAGAACCTACCTTTTGGAACGGTCTCGTGTAGTGCAAATAACAGATCCTGAAAGGAATTATCACTGCTTTTATCAGTTATGTGCCTCTGGAAAGGATGCAGAGAAGTACAAGCTAGGCCATCCAAGCTACTTCCACTACTTAAATCAAAGTAAGACCTATGAATTAGATGGAGTGAGCAGTGTGCAGGAATACATGAAGACAAGGAGAGCAATGGATATAGTTGGTATTGGTCTTGATGATCAGGATTCCATATTTCGCACCTTGGCAGCTATTTTACATCTGGGCAATATCGAATTTTCTCCTGGCAAAGAGCATGATTCTTCAACCATAAAGGATAAAAAATCTAGCCTTCATCTTCAGATGGCTGCTAATTTATTTATGTGTGATGCGAACCTTTTGCTTGCAACACTATGCACACGTTCAATTCAGACTCGTGAAGGATGTATTGTTAAAGCTCTTGACTGTAATGCTGCTGTAGCCAGTCGGGATGCATTAGCAAAGACTGTATATGCTCGATTGTTTGACTGGCTGGTTGAAAAGATTAATAGGTCTGTTGGGCAAGACCTGGATTCTCGGATGCAAATTGGAGTCTTGGACATTTATGGCTTTGAGTGCTTTAAGCATAACAGTTTTGAGCAGTTCTGCATTAATTTTGCAAACGAAAAACTTCAGCAACATTTCAATGAGCATGTATTTAAGATGGAGCAGGAGGAGTATAGCAAGGAAGAAATTAATTGGAGCTACATTGAATTCATTGACAACCAAGATGTCTTGGATTTGATTGAGAAGAAACCTATCGGAATAATTGCTCTCTTGGATGAAGCTTGCATGTTTCCGAAATCAACGCATGCAACATTTTCGATGAAGCTGTTTCAGAGCTTCCGAATTCATCCTAGGTTGGAAAAGACAAAGTTCTCGGAAACGGATTTTACCCTTTCCCACTATGCTGGCAAGGTTACTTATCAAACAGATTCCTTCCTGGATAAAAATCGAGACTATGTCGTGGTGGAACACTGCAATCTATTATCTTCATCAAAATGCTCCTTTGTTGCTGGTCTTTTCCCTTCACTGCCAGAGGAATCTTCACGATCATCGTACAAGTTTTCTTCTGTGGCCTCTAGATTTAAGCAACAACTTCAATCACTTATGGAAACGCTCAACTCAACAGAACCTCATTACATTCGCTGTGTGAAGCCAAATTCTTTGAACCGACCTCAAAAATTTGAGAATCAGAGCGTTCTACATCAGTTACGGTGTGGGGGTGTTCTAGAGGCTGTTCGAATAAGTCTAGCGGGTTATCCTACACGGAGGACTTATTCGGAGTTTCTGGATCGCTTTGGACTTTTGGCTCCAGAACTTATGGATGGAAGTTATGATGAAAAGGCTTTGACGGAGAGAATCCTACATAAGTTGAAACTTGAAAATTTCCAATTGGGCAGGAGCAAAGTATTTCTTAGGGCTGGTCAGATTGCTGTTTTAGATTCCCGACGAGCTGAGGTTTTGGATAATGCAGCAAAGCTTATTCAGGGCCGATTGCGAACATTTATTGCATGCAGGAATTTTGTCTCAACCCGGGCAGCTGCAATTGTTCTCCAGACATACTGCAGAGGATGCCGTGCTCGAAATATGTTTGCAGTAAAACGAGAAACAGCAGCTGCTCTTTCAATTCAAAAATATGCTCGCGGATGGCTATTTCGGCGTGCATATATGACACTTTATTCATCTGTTGTTCTTATACAATCTAGCATCAGGGGGTTGTCAACTCGTCAGAAATTTCTGCATAGAAGGGAACATATGGCTGCTATGTTAATCCAGGCCCGATGGAGAATGTGCAAAGCCCGCTCAGCTTTCCGACATCATCAAAGTTCTATTATAGCTGTACAATGTCTTTGGAGGCGGAAGCTGGCAAAAAGAGAGCTTCGGAGGCTTAAAATGGAGGCAAATGAAGCTGGTGCATTACGCTTAGCTAAGAATAAGCTTGAGAAGCAGCTGGAAGATCTCACATGGCGGTTGCATCTGGAAAAGAGATTACGGGTGTCCAATGAAGAGGCTAAGTTAGTTGAAATTTCAAAACTGCAAAAGGCATTGGAATCATTGAATTTGGAGTTGGATGCAGCTAAATCAGCTACTGTTAGCGAGTCCAACAAGAACACATTGCTTATAAGTCAGCTAGAATTATCAATGAGAGAGAAATCAGCGTTGGAGAGCAGACTGATTGGAATGTCAGACTTGAGCAAGGAGAACGCCTTTTTAAAGAGTTCATTGGAATCCTTGGAGAAGAAGAACTCTGCAGTGGAGGTCGAGCTTGTCAAGGCTCGAAAAGATAGTAATGATACCATGGAAAAGTTGCGGGAAGTGGAAAAAAACTATTTACAGCTCCAGCAAAATTTGCAAAGTTTGGAGGAGAAGCTCTCAAATTTAGACGATGAGAATCATGTTCTAAGGCAAAAAGCATTAAGTTCATCTCCTAAGAGAAACCATCCTGGGTTTGCCAAGTCATATTCGGAGAATTATTCTGGCATGCTTGCGCTTCCCAACACTGACAAGAAGCCTGTATTTGAGTCGCCTACACCTACAAAACTTGGTGTACCTTTTGCACACAGCCTATCAGAATCACGTCGATCAAAGATGACCGCTGAGAGGCATCAGGAGAATCACGAATTTCTCTTGAGGTGTATTAAAGAAGATTTGGGGTTCAAAGATGGTAAACCTGTGGCAGCTTGTATCATATATAAATGTCTTCTTCACTGGCGTGCTTTCGAGTCTGAGAGGACTGCGATTTTTGACCATATAATTGAGGGCATTAATGATGTTCTTAAGGTGGGGGATGAGAATAATATCTTGCCATATTGGTTGTCCAATGCATCAACACTTCTCTGCCTCTTGCAGAGGAACCTACGCTCAAATGGCTTTTTCTCGACGCCTTCTCAACGTTCTGCAGGGTATTCCGGATTTACTGGGAGGCTGGCACAAGGTTTGAAATCTCCTTTGAAATATATTGGATTTGAGGAGAGTATGTCAAACGTAGAAGCACGATATCCAGCTATACTCTTTAAGCAGCAATTGACTGCTTGTGTAGAGAAGATTTTTGGCTTGATTCGAGATAACTTGAAGAAAGAGATATCACCACTTCTGGGTCTTTGCATTCAGGCACCAAAAACTGTGCGTGTACACACTGGTAAATCGTCTAGATCACCGGGGAATGTTCCTCAACAATCCTTGAGCAGTCATTGGGACAGTATCATCAAGTTCTTGGATTCACTTATGAGTCATTTACGTGAAAATTATGTTCCTTCCTTTTTTATTCGCAAGCTCATCACCCAGGTTTTCTCTTTCATCAATATATCATTATTCAATAGTCTTCTATTGCGGCGTGAATGTTGCACATTTTCAAACGGGGAATACGTAAAATCTGGTCTTGCGGAACTGGAACGATGGATAGTTAATGCCACAGAGGAGTTTGCAGGAACCTCTTGGCATGAGCTAAATTATATCAGACAGGCTGTTGGGTTTTTGGTGATACATCAGAAGAGGAAAAAGTCTCTAGAAGAAATCAGGCAAGATCTTTGTCCGGCATTGACTGTCAGGCAAATTTACCGAATAAGTACCATGTATTGGGACGATAAGTATAGCACGCAGAGCGTGTCAAATGAGGTGGTTGCACAAATGAGGGATATTCTGAACAAGGATTCACAGAATTTCAACTCAAATTCATTCCTGTTGGATGACGATCTAAGCATTCCATTCTCTACTGAAGATATATCGAAGGCAATTCCTGCAATAGACCCGTCGGATGTTGAACTCCCACCGTTCCTGCGTGAATATCCTTGTGCCTTGTTTCTAATCCCAGATGAAACATGA 4551 0.4225 MSLRRGSNVWLEDRDSAWVAAEVVDVAGKQVRVVTDSGKKVLVAPEKLLPRDPDADHGGVDDMTKLTYLNEPGVLYNLARRYALNDIYTYTGSILIAVNPFTKLPHLYNAHMMEQYKGAPFGELSPHVFAVADASYRAMMNEARSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDDRTVEQQVLESNPLLEAFGNARTIRNDNSSRFGKFVEIQFDANGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGKDAEKYKLGHPSYFHYLNQSKTYELDGVSSVQEYMKTRRAMDIVGIGLDDQDSIFRTLAAILHLGNIEFSPGKEHDSSTIKDKKSSLHLQMAANLFMCDANLLLATLCTRSIQTREGCIVKALDCNAAVASRDALAKTVYARLFDWLVEKINRSVGQDLDSRMQIGVLDIYGFECFKHNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHATFSMKLFQSFRIHPRLEKTKFSETDFTLSHYAGKVTYQTDSFLDKNRDYVVVEHCNLLSSSKCSFVAGLFPSLPEESSRSSYKFSSVASRFKQQLQSLMETLNSTEPHYIRCVKPNSLNRPQKFENQSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFLDRFGLLAPELMDGSYDEKALTERILHKLKLENFQLGRSKVFLRAGQIAVLDSRRAEVLDNAAKLIQGRLRTFIACRNFVSTRAAAIVLQTYCRGCRARNMFAVKRETAAALSIQKYARGWLFRRAYMTLYSSVVLIQSSIRGLSTRQKFLHRREHMAAMLIQARWRMCKARSAFRHHQSSIIAVQCLWRRKLAKRELRRLKMEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRVSNEEAKLVEISKLQKALESLNLELDAAKSATVSESNKNTLLISQLELSMREKSALESRLIGMSDLSKENAFLKSSLESLEKKNSAVEVELVKARKDSNDTMEKLREVEKNYLQLQQNLQSLEEKLSNLDDENHVLRQKALSSSPKRNHPGFAKSYSENYSGMLALPNTDKKPVFESPTPTKLGVPFAHSLSESRRSKMTAERHQENHEFLLRCIKEDLGFKDGKPVAACIIYKCLLHWRAFESERTAIFDHIIEGINDVLKVGDENNILPYWLSNASTLLCLLQRNLRSNGFFSTPSQRSAGYSGFTGRLAQGLKSPLKYIGFEESMSNVEARYPAILFKQQLTACVEKIFGLIRDNLKKEISPLLGLCIQAPKTVRVHTGKSSRSPGNVPQQSLSSHWDSIIKFLDSLMSHLRENYVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELERWIVNATEEFAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYSTQSVSNEVVAQMRDILNKDSQNFNSNSFLLDDDLSIPFSTEDISKAIPAIDPSDVELPPFLREYPCALFLIPDET* 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00587 1516 Gene3D Kinesin motor domain 61 658 IPR036961 -
Eupl09g00587 1516 ProSiteProfiles Myosin motor domain profile. 58 728 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 Pfam Myosin N-terminal SH3-like domain 6 44 IPR004009 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 Pfam Myosin head (motor domain) 60 716 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 Pfam IQ calmodulin-binding motif 755 771 IPR000048 GO:0005515
Eupl09g00587 1516 Pfam IQ calmodulin-binding motif 780 799 IPR000048 GO:0005515
Eupl09g00587 1516 Pfam IQ calmodulin-binding motif 828 848 IPR000048 GO:0005515
Eupl09g00587 1516 Coils Coil 863 907 - -
Eupl09g00587 1516 ProSiteProfiles IQ motif profile. 827 856 IPR000048 GO:0005515
Eupl09g00587 1516 FunFam Myosin heavy chain 248 302 - -
Eupl09g00587 1516 ProSiteProfiles IQ motif profile. 779 806 IPR000048 GO:0005515
Eupl09g00587 1516 ProSiteProfiles IQ motif profile. 850 879 IPR000048 GO:0005515
Eupl09g00587 1516 ProSiteProfiles IQ motif profile. 802 831 IPR000048 GO:0005515
Eupl09g00587 1516 SMART MYSc_2a 52 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 ProSiteProfiles IQ motif profile. 754 783 IPR000048 GO:0005515
Eupl09g00587 1516 FunFam unconventional myosin-Va 829 877 - -
Eupl09g00587 1516 Coils Coil 971 1047 - -
Eupl09g00587 1516 SMART iq_5 801 823 IPR000048 GO:0005515
Eupl09g00587 1516 SMART iq_5 778 800 IPR000048 GO:0005515
Eupl09g00587 1516 SMART iq_5 826 848 IPR000048 GO:0005515
Eupl09g00587 1516 SMART iq_5 753 775 IPR000048 GO:0005515
Eupl09g00587 1516 SMART iq_5 849 871 IPR000048 GO:0005515
Eupl09g00587 1516 SMART DIL_2 1334 1441 IPR002710 -
Eupl09g00587 1516 Gene3D - 434 619 - -
Eupl09g00587 1516 ProSiteProfiles Dilute domain profile. 1159 1459 IPR002710 -
Eupl09g00587 1516 Pfam DIL domain 1335 1438 IPR002710 -
Eupl09g00587 1516 CDD MYSc_Myo11 72 716 IPR036018 -
Eupl09g00587 1516 PRINTS Myosin heavy chain signature 424 452 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 PRINTS Myosin heavy chain signature 88 107 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 PRINTS Myosin heavy chain signature 477 505 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 PRINTS Myosin heavy chain signature 145 170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 PRINTS Myosin heavy chain signature 192 219 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 Gene3D Myosin VI head, motor domain, U50 subdomain 306 597 - -
Eupl09g00587 1516 Coils Coil 919 939 - -
Eupl09g00587 1516 PANTHER MYOSIN 50 1448 - -
Eupl09g00587 1516 Gene3D - 830 878 - -
Eupl09g00587 1516 Gene3D - 730 780 - -
Eupl09g00587 1516 Gene3D - 781 829 - -
Eupl09g00587 1516 CDD MyosinXI_CBD 1110 1482 IPR037975 GO:0007015
Eupl09g00587 1516 Gene3D - 663 729 - -
Eupl09g00587 1516 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Eupl09g00587 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 819 882 IPR027417 -
Eupl09g00587 1516 Gene3D - 248 305 - -
Eupl09g00587 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 778 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00587 Eupl-Chr9 14309092 14347224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00587 1 1512 Myosins gene family AT4G33200 74.488 0.0 2316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00587 K10357 - nnu:104600559 2560.79