Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00569 ATGATGAGTGCAAGAACAAGGTCTCCTTTCACTGCAACTCAATGGCAAGAGCTTGAGCATCAAGCTCTCATCTTCAAATACATGGTGTCAGGAGTTCCCATCCCACCTGATCTCATCTTCCCTATCAAAAGAAGCTTGGACTCTTCAATCTCTTCCAGGCTCTTCCCTCCCCAACCAATGGGGTGGGGATGTTTTCAGATGGGTTTTGGCAGGAAAGCAGACCCTGAGCCAGGCAGGTGCAGAAGAACAGATGGGAAGAAGTGGAGATGCTCAAAGGAAGCATTCCCAGATTCAAAGTACTGTGAAAGACATATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTATTACAACAGCCATCCCATCAATCACCAGAAACCCCTCCACCACCACTATCACCACCACCACCGACACCACCTCTTCTTACTCCCTTTCTTCATCAATGGCTGTTGAAAACCATCACCACCACCATCCATATCACAATACCCCTCTTCATGCCTTCCTTTATCCTCATTCCTCCTCTTATAGACCTCCTGATATTGGTTTCTCACCCCAAAACAACACTACCCATTTGGTTTTAGACTCTGGATCTTACTCTCAAGCAGATAAAGATTGCAGAAGAAACAGGTATTTTCATGGACTGAAGGAAGATGTAGATGAGCGTGCTTTCTTCTCAGAAGCTTCTGGGACTCTGAGGAACTTATCCGATTCTTCTCTTGATAATCCATGGCGACTTACACCACTGAGGATGAATTCCTCCCCTCTTGCTCAATCGAAGCAGAGGAGTTGCTCTGCTATACAAAGTGGGGATTCTGAATTGCAGTTGCAAAGTCTAACTGATATCTCTAAACAGCAAGAACAACATTGCTTTGTTTTGGGTACAGATTTCAAATCTGAAAAACCTATGAAGGTGGAGAGAGAAGAGCAACCACTTCGGCACTTCTTTGATGAATGGCCACCCAAGAACAGAGACTCCTGGCTCGATTTAGAGGAGGACCGATCGAATCGAGCATCGTTCTCGACAACCCAGCTCTCAATGTCCATCCCCATGTCTTCTCCAGACTTCCAACTATCCAATTCAAGAACCCAGAATGATGGTTAA 1110 0.4568 MMSARTRSPFTATQWQELEHQALIFKYMVSGVPIPPDLIFPIKRSLDSSISSRLFPPQPMGWGCFQMGFGRKADPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGRNRSRKPVEVITTAIPSITRNPSTTTITTTTDTTSSYSLSSSMAVENHHHHHPYHNTPLHAFLYPHSSSYRPPDIGFSPQNNTTHLVLDSGSYSQADKDCRRNRYFHGLKEDVDERAFFSEASGTLRNLSDSSLDNPWRLTPLRMNSSPLAQSKQRSCSAIQSGDSELQLQSLTDISKQQEQHCFVLGTDFKSEKPMKVEREEQPLRHFFDEWPPKNRDSWLDLEEDRSNRASFSTTQLSMSIPMSSPDFQLSNSRTQNDG* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00569 369 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl09g00569 369 Pfam WRC 75 117 IPR014977 -
Eupl09g00569 369 PANTHER GROWTH-REGULATING FACTOR 5 8 356 IPR031137 GO:0005634|GO:0006351|GO:0032502
Eupl09g00569 369 MobiDBLite consensus disorder prediction 340 369 - -
Eupl09g00569 369 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Eupl09g00569 369 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl09g00569 369 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00569 Eupl-Chr9 13909523 13911518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00569 3 117 GRF Transcription Factor Family AT3G13960 76.923 4.75e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl09g00569 WRC 9.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00569 - - nnu:104609332 543.117