Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00566 ATGAGTAATTGGTTGGGATTCTCTCTGACTCCACACCTGAGCATCGACGAGGGTTTTGGAGGAGGAGAAGATGATGGAGGGTTCTCCTCTCATATGTCGGTCATGCCTTTGCGTTCTGATGGGTCTCTTTGCGTTGTTGATGCTTTCAGGCGTTCTCATGGAGGAGAATGGAGATATGAGAACACCATGGCTACTGCAAGTAATCAAGAGAGAGAAGGACCAAAGCTTGAAGATTTCTTGGGTGGATACTCAAACTCCACTCAAGAGAACAGCAATGTTTACTACCAAAGTCAACAACAAACATTCCACCAAAGAGATCCCCATAGTGGGTGTAGAATCAATATGAACATACCTCCTAACTTCAGCAGTAGTGGAGAGATAGAAAGAGAAGATAATCTCCAAAACCCATCTCAATTAATCCAATCCTTCCATCATCCCCAACACCATTACAATGAGAACTCACAAACAGTAATCCCCACTTCTCACCTTCAAAACTCTAACCCTAACCCTAACCCTAACAACAATATGTACCATCATGTTCCTCTTGAGAGTGCAACTTCAATTTCTGGGTTCAAGTCATGGTTGCGTCAAACCCCATTTTCAAGCGAGAAATCTTCAGCTGAAGCAAACAACTCTAACTTTCAGTCTCTCTCCCTTTCTATGAGTCCTGGCTCACAGCCTGGTGCATCTGGAGTTTCGCAATCTCCCGCGACAGAAAATCGTAAACGACCAGTTGGGAAGTCTGGCACTAGAGAACCAGTTCCTCGTAAATCAATCGATACGTTTGGGCAAAGAACCTCTCAATATCGTGGCGTTACGAGGCATAGATGGACCGGAAGATATGAGGCCCATTTGTGGGATAACAGTTGCAGAAAGGAAGGACAAACAAGGAAAGGAAGGCAAGTTTATCTTGGTGGATATGATAAGGAAGAAAAAGCAGCCAAGGCTTATGATTTAGCTGCACTGAAGTACTGGGGTCCTACGACTCATATAAATTTCCCTCTGAGCGCTTATGAGAAAGAGCTTGAAGAGATGAAGAACATGACAAGACAGGAATTTGTAGCCAACTTAAGAAGGAAAAGCAGTGGTTTCTCAAGGGGGGCGTCTGTATACAGAGGAGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTCGAATAGGAAGGGTTGCAGGGAACAAGGACTTGTACCTTGGAACATTCAGCACTCAAGAGGAAGCTGCTGAAGCCTATGATATTGCAGCGATTAAGTTCCGAGGGGTAAGCGCAGTAACGAACTTCGACATCAGCAAGTATGATGTAAAGCGTATTTGCTCAAGCACCACCCTCATTGGTGGCGATCTCGCAAAGCGCTCCCCGACTGTTGTCTCCGATGAACCCCCTCTTGCTATAACAAATGGCGAGTCGGGTGATGAATTAGCCAATATGGTTTGGACCAACAACGACGAACAACAGCTACAACGTAGCCTGGACACCCATGACAATATCTCACTGGTGCCTTCAATGAGTGATCCGAATTCATCAAGCCCAGGAAGCCCAAAACGTTCTGTTGCTTCACAAGGCGAGTATGGGGTTGGAGGTGGAGGAGACTACTCTCATGGGTTCTTCTCTTTGCATGCTCCCAAGTACGAGAGCGGCAGTGATGATCACATTGCAAGTAATAGTGGGGCTGGGAATGTGAATTGGATGGTGACAGGTCGGCCGTCCAATCTATCAGTGGTTCATCATCAACTACCAATGTTTGCACTGTGGAATGAATAG 1761 0.4594 MSNWLGFSLTPHLSIDEGFGGGEDDGGFSSHMSVMPLRSDGSLCVVDAFRRSHGGEWRYENTMATASNQEREGPKLEDFLGGYSNSTQENSNVYYQSQQQTFHQRDPHSGCRINMNIPPNFSSSGEIEREDNLQNPSQLIQSFHHPQHHYNENSQTVIPTSHLQNSNPNPNPNNNMYHHVPLESATSISGFKSWLRQTPFSSEKSSAEANNSNFQSLSLSMSPGSQPGASGVSQSPATENRKRPVGKSGTREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEEKAAKAYDLAALKYWGPTTHINFPLSAYEKELEEMKNMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVSAVTNFDISKYDVKRICSSTTLIGGDLAKRSPTVVSDEPPLAITNGESGDELANMVWTNNDEQQLQRSLDTHDNISLVPSMSDPNSSSPGSPKRSVASQGEYGVGGGGDYSHGFFSLHAPKYESGSDDHIASNSGAGNVNWMVTGRPSNLSVVHHQLPMFALWNE* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00566 586 CDD AP2 369 430 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 PRINTS Ethylene responsive element binding protein signature 410 430 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 PRINTS Ethylene responsive element binding protein signature 269 280 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 70 503 - -
Eupl09g00566 586 MobiDBLite consensus disorder prediction 204 241 - -
Eupl09g00566 586 MobiDBLite consensus disorder prediction 159 179 - -
Eupl09g00566 586 FunFam AP2-like ethylene-responsive transcription factor ANT 267 336 - -
Eupl09g00566 586 FunFam AP2-like ethylene-responsive transcription factor 369 430 - -
Eupl09g00566 586 ProSiteProfiles AP2/ERF domain profile. 268 334 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 SMART rav1_2 370 434 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 SMART rav1_2 268 340 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 SUPERFAMILY DNA-binding domain 267 336 IPR016177 GO:0003677
Eupl09g00566 586 SUPERFAMILY DNA-binding domain 369 430 IPR016177 GO:0003677
Eupl09g00566 586 MobiDBLite consensus disorder prediction 204 262 - -
Eupl09g00566 586 MobiDBLite consensus disorder prediction 496 516 - -
Eupl09g00566 586 Pfam AP2 domain 268 326 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 Pfam AP2 domain 369 420 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 Gene3D AP2/ERF domain 267 336 IPR036955 GO:0003700|GO:0006355
Eupl09g00566 586 Gene3D AP2/ERF domain 370 430 IPR036955 GO:0003700|GO:0006355
Eupl09g00566 586 CDD AP2 267 336 IPR001471 GO:0003700|GO:0006355
Eupl09g00566 586 MobiDBLite consensus disorder prediction 496 524 - -
Eupl09g00566 586 ProSiteProfiles AP2/ERF domain profile. 370 428 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00566 Eupl-Chr9 13862181 13866591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00566 1 454 AP2-EREBP Transcription Factor Family AT1G72570 52.183 3.43e-142 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl09g00566 AP2 7.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00566 K09285 - nnu:104609334 866.685