Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00562 ATGGCTCCCAAGACTGATCGACACACTAAAAGGGATGTTAACAGAGGAGCATGGACAGCTGAAGAAGATCAAAAATTGGCTCAAGTTGTTGAAATCCATGGTGCAAAGAGGTGGAAGTCAATTGCAGCAAAAGCAGGTCTTAATCGATGCGGTAAGAGTTGCAGGTTGAGATGGATGAATTATCTAAGACCAAACATCAAGAGAGGCAACATCTCAGACCAAGAAGAAGATTTGATACTTAGACTTCATAAACTCTTAGGAAACAGGTGGTCGTTGATTGCTGGGAGATTACCAGGTCGAACAGATAATGAGATTAAGAACTACTGGAATTCTCATTTGAGCAAGAAAAAAAATCAGAAGGAAAAAGAAAGCAGAGATCCAACGACCCATGAGACTAAACTTCTGGAAACAGCCGCACTGGAGAAGGACCACGTAGAAGGTAGTGAAGAAGGTAACTCTAAAGGAGGAGGGGACTCAGAATCTAATTTTAATGTCAATGAGTTCTTTGATTTTTCTAGGGAGGGGCCTTTGAATTTGGAGTGGGTGAGTAGATTCCTTGAAGTTGATGAGGGTTTGTATGGATTTTCATGA 591 0.4129 MAPKTDRHTKRDVNRGAWTAEEDQKLAQVVEIHGAKRWKSIAAKAGLNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKKNQKEKESRDPTTHETKLLETAALEKDHVEGSEEGNSKGGGDSESNFNVNEFFDFSREGPLNLEWVSRFLEVDEGLYGFS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00562 196 MobiDBLite consensus disorder prediction 139 161 - -
Eupl09g00562 196 FunFam MYB-related transcription factor 14 67 - -
Eupl09g00562 196 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 138 - -
Eupl09g00562 196 Gene3D - 7 68 - -
Eupl09g00562 196 SMART sant 67 115 IPR001005 -
Eupl09g00562 196 SMART sant 14 64 IPR001005 -
Eupl09g00562 196 Gene3D - 71 140 - -
Eupl09g00562 196 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Eupl09g00562 196 CDD SANT 72 113 IPR001005 -
Eupl09g00562 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Eupl09g00562 196 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Eupl09g00562 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Eupl09g00562 196 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Eupl09g00562 196 MobiDBLite consensus disorder prediction 139 153 - -
Eupl09g00562 196 CDD SANT 17 62 IPR001005 -
Eupl09g00562 196 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Eupl09g00562 196 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00562 Eupl-Chr9 13808293 13809382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00562 9 168 MYB Transcription Factor Family AT3G13540 50.581 2.64e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl09g00562 Myb_DNA-binding 1.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00562 K09422 - pop:7492298 283.493