Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00547 ATGCTTCTTGTGATCATTATTGTGTGGCTTCTTTTAATGGGATTCGCAACGACCCAAGTGCTCGTTTTCATCTCATCTCAGATGTTACTTGTTGTTTTCGTCTTCGGAAACACAGCCAAGACTGTATTTGAAGCCATCATGTTTGTATTTGTGATGCACCCATTTGATGTTGGTGATCGCTGTGTTGTTGATGGAGTTCAGATGATTGTCGAAGAGATGAACATTTTGACAACAGTCTTCCTCAGATATGACAATGAGAAGATATACTATCCAAATTCAGTGTTGTCTACGAAATCCATCAGCAACTTCTACAGAAGCCCAGAAATGGGTGATGGTGTGGATTTTTCCGTTGATGTTTCAACTACAGTGGAGAGTATTGGAGCTCTAAAAGATAGAATTAAAAGGTACATAGTGAGCAAGCCTCAACATTGGAACCCTAACCACAGTGTAGTGGTGAAGGAGATTGAGGATGTGAACAAGATGAAGATGGCTCTCTATGTTACTCACACCATGAACCATCAGAACATGGGAGAGAAGACCAATCGCAGATCCGAACTAGTCTTCGAGCTGAAGAAAATATTCGAAGATCTCTCTATAAAATATCATCTCCTGCCTCAAGAAGTTCACCTTAGCTATGTCGGTTCCGCAGCAACAGCACCAATGAGCATTGGACATTGA 678 0.413 MLLVIIIVWLLLMGFATTQVLVFISSQMLLVVFVFGNTAKTVFEAIMFVFVMHPFDVGDRCVVDGVQMIVEEMNILTTVFLRYDNEKIYYPNSVLSTKSISNFYRSPEMGDGVDFSVDVSTTVESIGALKDRIKRYIVSKPQHWNPNHSVVVKEIEDVNKMKMALYVTHTMNHQNMGEKTNRRSELVFELKKIFEDLSIKYHLLPQEVHLSYVGSAATAPMSIGH* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00547 225 Gene3D - 54 103 IPR023408 -
Eupl09g00547 225 FunFam Predicted mechanosensitive ion channel 54 103 - -
Eupl09g00547 225 SUPERFAMILY Sm-like ribonucleoproteins 44 103 IPR010920 -
Eupl09g00547 225 Pfam Mechanosensitive ion channel 2 199 IPR006685 GO:0016020|GO:0055085
Eupl09g00547 225 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 211 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00547 Eupl-Chr9 13576566 13580659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00547 1 211 Mechanosensitive Ion Channel Family AT5G12080 57.346 1.82e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00547 K22048 - ming:122080321 380.178