Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00532 ATGCAAAACATATCCAGGAAAGAGTCTGATCAAAGTTCCATCCATTCAATGTCTCCCTGTGTTGTTAGTTGCCCATCATGGTGGAATTCCACTGGATCGCAAATTCCACAATCTTGCCTATCCAAGAGTCTAAGCTTGAACATGGACTCTCCACGTCAACATTTTCATAATGTGAAGCAATTAGGCTTTCCACTGCAGGACCAGGACTCCTCATCAACTCAATCAACTGGTCAATCTCACAATGAAGTGGCGACTATGGGGGAAGGCAACCCTAATGGGCAATGCATTTCAGCTCAATCTGGATATGATGAAACTCATGGAAGGCGTGTGGAAGGTGACATGAAATCAGTTCTGTCACTGGGAACTCCAGATTTTGTCTTCCCTCGTTCACAAGTCGATTATAGCCAGTCAGTGGCTCGCATTCCATACCCTTATGCTGATCCATACTTTCTGGCTGCTTATGGACCACAGGCTATTATTCATCACCAAATGGTGGGTGTCGCACCTGCACGAGTCCCACTGCCTCTTGATCTTGCAGAAGATGAACCCATTTTTGTCAATGCAAAACAGTACCGTGGGATCATCAGACGGAGGCAGGCCCGTGCCAAGCTTGAGGCTCAAAACAAACTCCTCAAAGCTCGGAAGCCATATCTTCACGAGTCTCGGCATCTTCATGCATTGAAAAGGGCTAGGGGATCTGGTGGACGTTTTCTCAACACAAAGAAGCCGCAGCATTCCAAGTCTGCTCCCACCACTGACGGCCAAAATGCCTCGGACTCGGAAGTTATACAGTCGGAAACAAGCAATGCTGGTGCTTCCACCACTTCCTGCTATGACATAACTAGTGTCTCCAACAGCGACAGCATGTTCCGGCAACCTAATCACAGGTTCTCAGGCTACCCTCCTCACTTGGGTGGGACCATTCAAAGTGGAGGGGGCATGATGTGTAATGGGTCCCAGCACCGTGTTCCTGTCATCTAA 981 0.4832 MQNISRKESDQSSIHSMSPCVVSCPSWWNSTGSQIPQSCLSKSLSLNMDSPRQHFHNVKQLGFPLQDQDSSSTQSTGQSHNEVATMGEGNPNGQCISAQSGYDETHGRRVEGDMKSVLSLGTPDFVFPRSQVDYSQSVARIPYPYADPYFLAAYGPQAIIHHQMVGVAPARVPLPLDLAEDEPIFVNAKQYRGIIRRRQARAKLEAQNKLLKARKPYLHESRHLHALKRARGSGGRFLNTKKPQHSKSAPTTDGQNASDSEVIQSETSNAGASTTSCYDITSVSNSDSMFRQPNHRFSGYPPHLGGTIQSGGGMMCNGSQHRVPVI* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00532 326 MobiDBLite consensus disorder prediction 65 91 - -
Eupl09g00532 326 MobiDBLite consensus disorder prediction 229 274 - -
Eupl09g00532 326 SMART cbf3 179 240 IPR001289 GO:0003700|GO:0006355
Eupl09g00532 326 Gene3D - 180 242 - -
Eupl09g00532 326 PRINTS CCAAT-binding transcription factor subunit B signature 214 237 IPR001289 GO:0003700|GO:0006355
Eupl09g00532 326 PRINTS CCAAT-binding transcription factor subunit B signature 183 205 IPR001289 GO:0003700|GO:0006355
Eupl09g00532 326 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 182 237 IPR001289 GO:0003700|GO:0006355
Eupl09g00532 326 ProSiteProfiles NF-YA/HAP2 family profile. 180 240 IPR001289 GO:0003700|GO:0006355
Eupl09g00532 326 ProSitePatterns NF-YA/HAP2 subunit signature. 185 205 IPR018362 GO:0003677|GO:0016602
Eupl09g00532 326 MobiDBLite consensus disorder prediction 239 274 - -
Eupl09g00532 326 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 1 292 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00532 Eupl-Chr9 13266876 13272685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00532 26 311 CCAAT-HAP2 Transcription Factor Family AT1G54160 45.425 3.93e-58 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Eupl09g00532 CBFB_NFYA 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00532 K08064 - nnu:104600617 419.468