Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00515 ATGATGAATACGAACTTCGAACTTTCCGACTTCCTAGACGTCGATGAATGGTTTGAGGATCATCCAGCTTCCATGGCTTCTGGGTCTTCTCAGAATCCGATCTCTCTAGCGATGAACATCGATATCGACCGTTCTGGCATGGGTATTATTCATGGCGTCGAGACTAGTAGCAACAAGAGAAATGGTAGTGAGAAGAATAAAAAGGAGAAGGATGACACAGCAAAAGTTGCATTCAGAACAAAATCTGATCTTGAGATCTTAGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCGAATCCAAGGAATTACTATCGATGTTCAGTTGACGGATGCCCTGTGAAGAAGAGGGTTGAAAGAGATGGGGAAGATCCAAGCTATGTGATAACAACATATCAGGGCGTCCATAACCATGAAAGCCCCTCTCTCTAA 450 0.44 MMNTNFELSDFLDVDEWFEDHPASMASGSSQNPISLAMNIDIDRSGMGIIHGVETSSNKRNGSEKNKKEKDDTAKVAFRTKSDLEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDGEDPSYVITTYQGVHNHESPSL* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00515 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 147 IPR044810 GO:0003700
Eupl09g00515 149 Pfam WRKY DNA -binding domain 88 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g00515 149 Gene3D WRKY domain 71 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g00515 149 SUPERFAMILY WRKY DNA-binding domain 80 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl09g00515 149 FunFam WRKY transcription factor 57 73 147 - -
Eupl09g00515 149 MobiDBLite consensus disorder prediction 58 73 - -
Eupl09g00515 149 MobiDBLite consensus disorder prediction 51 73 - -
Eupl09g00515 149 ProSiteProfiles WRKY domain profile. 82 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl09g00515 149 SMART WRKY_cls 87 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00515 Eupl-Chr9 12571890 12573718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00515 6 146 WRKY Transcription Factor Family AT5G26170 48.684 9.23e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl09g00515 WRKY 6.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00515 - - oeu:111384244 184.496