Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00499 ATGGAGGAGATGTCTCCGGCGGTTTTGGTGCCATTTAGGTTGGGTAATTCCATCTGTGATAATTCGGCGATTGCAACTCACATGGAAATCACACGACTCAAGCTGATAACAGACACTGCCAGCTTGTTGTCTGATCCCACATCTAAGCTGCCTCCTGAGTCTGTTTCTTGTGAAGGTGAAGGTTGTACTTGTAGTAATCCACAGAGTGAAGTTGATATAGTAACCATGTTAGTACCAGACGAAGAAGATAGGGAAGGAGGAGCTGCGTTGTTCCAGATGGTACCTGAAAGTGAAAGCATTTGTGTGGCTAGCGATGCCATAATTCAGGAAAGCGAGGAAGATGATAACTTATCTGTGGGCGGCGATCAAATATTCGATAGCTCTTGTGCTCTTTCTGTGGCAAGTGATACCAGTAGCATATGTGGTGAAGAATTGTTAGCTTTGGAGGCTGCTTGTGACATAAGCACACTGAGTTCTGTAGACATTGAAAAGAGTATTGGCAATATTCAATTTATTGCAAAGGCTGCTGCTATAGAGGAACCGAGTGTTAAGCAGGAGTCCATGGGTGATCTCCTTGCTGTGGCAACGGGCCTTGAGGTTCAGGTTGAAGATGGAACTGATTCAAAGACATCGGCAGTGGTTATTCAGGTGCCTCGGGAGAAGAGGATCATTGGAACTGGCAGCAGAGGCATTTTTGACTTGGATTGTGTACCCCTTTGGGGATCAATATCTATCTGTGGGAGAAGATCAGAGATGGAAGATGCTTTTGCAGCTGTCCCTTGGTTTTCGAAAATTCCTATTCAAATGCTAATTGGTGATACCTTGGTGAATGGCATGAACCAAAGTTTGAGTCACTCAATTGCTCATTTCTTTGGAGTCTATGATGGCCATGGGGGTTCTCAGGTTGCTGATTACTGTCGTGATCGTATCCATTCGGCTCTAGTTGAGGAGATGGAAATCTCGAAAGAAGGTTTAGGTGATGGAAGCATCCACGATAACTGGCCCGTGCTATGGGAGAAAACATTCACAAATTGCTTTATGAAAGTTGATGCTGAGGTTGGAGGAAGAGTCAGCAGAGGCAGTGTTGAGGGTAGTCCTGGACCTGTTGCTCCAGAAACTGTTGGTTCTACTGCTGTGGTTGCCGTTATTTGTTCGTCCCACATTATAGTCGCAAACTGTGGTGATTCAAGAGCAGTATTGTGTCGTGGCAAAGAACCCATGCCATTGTCAGTGGATCATAAACCAAATAGAGAAGACGAATATGCAAGGATTGAAGCAGCCGGAGGCAAGGTCATACAGTGGAATGGACACCGTGTGTTTGGTGTTCTTGCAATGTCAAGGTCCATTG 1348 0.454 MEEMSPAVLVPFRLGNSICDNSAIATHMEITRLKLITDTASLLSDPTSKLPPESVSCEGEGCTCSNPQSEVDIVTMLVPDEEDREGGAALFQMVPESESICVASDAIIQESEEDDNLSVGGDQIFDSSCALSVASDTSSICGEELLALEAACDISTLSSVDIEKSIGNIQFIAKAAAIEEPSVKQESMGDLLAVATGLEVQVEDGTDSKTSAVVIQVPREKRIIGTGSRGIFDLDCVPLWGSISICGRRSEMEDAFAAVPWFSKIPIQMLIGDTLVNGMNQSLSHSIAHFFGVYDGHGGSQVADYCRDRIHSALVEEMEISKEGLGDGSIHDNWPVLWEKTFTNCFMKVDAEVGGRVSRGSVEGSPGPVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGKEPMPLSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00499 449 SMART PP2C_4 229 449 IPR001932 -
Eupl09g00499 449 PANTHER PROTEIN PHOSPHATASE 226 449 IPR015655 GO:0004722|GO:0006470
Eupl09g00499 449 Pfam Protein phosphatase 2C 267 449 IPR001932 -
Eupl09g00499 449 CDD PP2Cc 244 449 IPR001932 -
Eupl09g00499 449 ProSiteProfiles PPM-type phosphatase domain profile. 239 449 IPR001932 -
Eupl09g00499 449 SUPERFAMILY PP2C-like 238 449 IPR036457 -
Eupl09g00499 449 Gene3D - 226 449 IPR036457 -
Eupl09g00499 449 FunFam Protein phosphatase 2C 50 237 449 - -
Eupl09g00499 449 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00499 Eupl-Chr9 12184273 12186753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00499 1 449 PP2C-type Phosphatase Gene Family AT1G72770 46.358 2.09e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00499 K14497 - nnu:104600643 598.971