Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00496 ATGGAAGATCGTACGGAGGAGGAGAAGGGCGAGCCCTCGGAGGGGGAGACACTGGGCTCGAGCCTGACCATGGAGAAGGTGGCTGCAGCCAAGCAGTTCATCGAGAACCACTATAGAGCCCAGATGAAGAACATCCAAGAGCGAAAGGAAAGACGCTGGGTATTAGAAAAGAAGTTAGCTTCTTCAGATGTCCCCGAGGAGGAACAAATCCATCTAATCAAGGATTTGGAGCGGAAAGAAACAGAGTTTATGCGACTTAAAAGACACAAGATTTGTGCTGATGACTTTGAGCTTTTAACCATTATCGGGCGAGGAGCTTTTGGAGAGGTTAGGCTATGTCGAGAGAAGACATCTGGCAATATATATGCCATGAAAAAGTTGAAGAAATCTGAAATGCTTAGCAGGGGCCAGGTTGAACATGTTAGAGCTGAAAGGAACTTGCTTGCAGAAGTTGCCAGCCACTGCATTGTGAAGCTCTACTATTCATTTCAAGATGCCGAATATCTATATCTAATCATGGAATATTTGCCTGGTGGTGACATGATGACTCTGCTGATACGAGAAGACACCTTAACTGAAAGTGTGGCTAGATTTTACATTGCTCAAAGCGTTTTGGCCATAGAGTCCATTCATAAACACAACTACATTCACAGAGATATTAAACCTGACAATCTTCTACTGGACAAAAATGGCCACATGAAACTTTCTGATTTTGGTCTTTGCAAGCCTCTCGATTGTACAATTCTATCTCCTCTAAAAGAAAATGAAACCATGGATGATGAGAATTTGAGGGAATCAATGGATATTGATGGATGCTTCCCAGATACAGTTAATGGGCGCCGGTGGAAAAGCCCCCGTGAACAACTTCAGCATTGGCAGATGAATAGGAGGAAGCTGGCATTTTCTACAGTGGGCACACCAGACTATATTGCCCCAGAAGTATTACTGAAGAAAGGCTATGGCATTGAATGTGACTGGTGGTCACTAGGTGCAATAATGTATGAGATGCTTGTTGGTTATCCCCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTGCACTGGAGAAATCACTTAAAGTTTCCGGAAGAGGCACGGTTGACACCTGAGGCAAAGAATCTTATCTGTAGGTTGTTATGTGATGTTGACCACAGGCTAGGTACTGGAGGGGCGGACCAAATAAAAGCTCATCCTTGGTTCAAAGATGTCGTATGGGACAAACTCTATGAAATGGAAGCAGCATTTAAACCAGAGGTCAACGGGGAACTAGATACTCAAAACTTTTTGAAGTTTGATGAGTTGGATCCTCCAACAGCTGCAAGAACTGGTTCAGGACCGTCACGCAAGATGCTATTGACTCCCAAAGATTTGAGTTTTGTTGGCTATACATACAAGAACTTTGATGCAGTCAAGGGGCTACAGCAATCTTTTGATATGAAGAGGAGTTCATCACCAAAACGGCCATCCATCGGTTCTATCTTCGGTGATTCTGTGATGGACTACTCTATGAAAGCCGCAACCGAGGAAACAGAAACACACAGGCTTGCATCATCAGGTGATGCCATGTCTCCCTGA 1584 0.4413 MEDRTEEEKGEPSEGETLGSSLTMEKVAAAKQFIENHYRAQMKNIQERKERRWVLEKKLASSDVPEEEQIHLIKDLERKETEFMRLKRHKICADDFELLTIIGRGAFGEVRLCREKTSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREDTLTESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTILSPLKENETMDDENLRESMDIDGCFPDTVNGRRWKSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGIECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLKFPEEARLTPEAKNLICRLLCDVDHRLGTGGADQIKAHPWFKDVVWDKLYEMEAAFKPEVNGELDTQNFLKFDELDPPTAARTGSGPSRKMLLTPKDLSFVGYTYKNFDAVKGLQQSFDMKRSSSPKRPSIGSIFGDSVMDYSMKAATEETETHRLASSGDAMSP* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00496 527 Gene3D Transferase(Phosphotransferase) domain 1 302 421 - -
Eupl09g00496 527 ProSiteProfiles Protein kinase domain profile. 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00496 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Eupl09g00496 527 FunFam Non-specific serine/threonine protein kinase 180 247 - -
Eupl09g00496 527 Gene3D Phosphorylase Kinase; domain 1 60 179 - -
Eupl09g00496 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 449 - -
Eupl09g00496 527 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Eupl09g00496 527 SMART pkinase_C_6 404 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl09g00496 527 Gene3D Phosphorylase Kinase; domain 1 422 431 - -
Eupl09g00496 527 SMART serkin_6 96 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00496 527 FunFam Non-specific serine/threonine protein kinase 302 421 - -
Eupl09g00496 527 SUPERFAMILY Protein kinase-like (PK-like) 93 450 IPR011009 -
Eupl09g00496 527 ProSiteProfiles AGC-kinase C-terminal domain profile. 404 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl09g00496 527 CDD STKc_NDR_like 94 468 - -
Eupl09g00496 527 Pfam Protein kinase domain 295 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00496 527 Pfam Protein kinase domain 97 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00496 527 FunFam Non-specific serine/threonine protein kinase 57 179 - -
Eupl09g00496 527 MobiDBLite consensus disorder prediction 1 22 - -
Eupl09g00496 527 Gene3D Transferase(Phosphotransferase) domain 1 180 245 - -
Eupl09g00496 527 CDD MobB_NDR_LATS-like 30 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00496 Eupl-Chr9 12116398 12139450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00496 1 480 AGC Kinase Gene Family AT4G33080 82.744 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Eupl09g00496 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00496 K08790 - nnu:104590399 940.258