Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00490 ATGTCTTCGATATACGTCTCGGAGCCTCCGACGAAGGGGAAGGTGATCGTGAAGACGAACTATGGGCCACTCGACATCGAGCTTTGGCCCAAAGAAGCGCCAAAAGCTGTGAGGAACTTCGTCCAGCTGTGCCTCGAGGGTTACTACGAGAACACCATTTTCCACCGAGTCATCAAATCCTTTCTTGTTCAAGGCGGTGATCCCACTGGCACAGGCACAGGTGGTGAAAGCATTTATGGGAGTGCATTTTCTGATGAGTTTCATTCGCGTCTAAGATTCAAGCATAGGGGCTTGGTTGCATGTGCGAATGCTGGGTCACCACATTCCAACGGAAGTCAGTTCTTTTTTACTTTGGACCGCTGTGATTGGCTTGATCGAAAGAACACCATTTTTGGAAAGGTAACTGGTGAATCAGTTTTTAATCTTCTGAGGTTAGGTGAAGTTGACACTGATAAGAACGATCGGCCGTTGGATCCACCTCCCAAGATACTCTCTGTTGAGGTATTATGGAACCCATTTGATGATATTATTCCTAGGAAAGCACCCGGAAAGTCTTCGTCTCATTCCACTACTGACACTGAAAACAAGGATCAGAAGAAGAAAGCTGCAAAAAAGCTAAACTTGCTTTCGTTTGGGGAAGAAGCAGAAGAAGAGGAGAGAGAATTGGCTGCTGTAAAAGAGAAGATTAAGAGTAGCCATGATGTATTGAATGATCCTCGTCTCCTTAAAGAAGAAGTGCCGAAAAAAGAACTGAGCCCATCAGAAGTCAAGAGGACAAGGAATTTGCAATTATCTGTAAGAGGAACTCTAAGCTCAAAAAAAGAAGACTCGCAAAAAGAACCAGAAATCGATCTTTCTAGTTCTCGTGATCTTAGTGATGAAGATGAGGCCCAATTTGATGCACGTATGCGTCTTCAAATTCTTAAAAAGCGAAAGGAGCTAGGAGATCACCCAACTAGGCAAAAATTGCGTAATGAGAGTTCTACTCCAAAGGAAGATGGAATGCCCCCTCCAAGTGCCAACCATGAGGACTTCGACAACCAACCCAAGTTGGAAAAGTTGTCTTTGAAGAAGAAGGGTATAGGCTCAGAAGCCAGGGCTGAACGAATGGCTAAAGCAGATGGAGACATACAGCTGTTGGGTCATGCTGAGCAAGTTAGACAGTTGCAGAAACAGAAGAAACGCAGGCTTCAGGGCCGTGAAGAAGAGGTGTTGGCAAGACTTGAGAAGTTTAAGAAGACCATTTCTACCAAGCCCATTGCACCAAGTGGTGAGTATGGAGGTGGCGAAGACTTATCTGGATGGACAGAAAATCGGTTGAAATTCACACCTGAGACTTCTGCCAAGGATGGCATGACTCGGAAAAATGACCCGGATGATTATGTGGTACACGATCCTCTTCTGGAGAAGGGAAAAGAGAAGTTCAACAAAATGCAAGCCAAGCAAAAGCGACGAGAGCGGGAATGGGCTGGCAAATCTCTTACTTGA 1488 0.453 MSSIYVSEPPTKGKVIVKTNYGPLDIELWPKEAPKAVRNFVQLCLEGYYENTIFHRVIKSFLVQGGDPTGTGTGGESIYGSAFSDEFHSRLRFKHRGLVACANAGSPHSNGSQFFFTLDRCDWLDRKNTIFGKVTGESVFNLLRLGEVDTDKNDRPLDPPPKILSVEVLWNPFDDIIPRKAPGKSSSHSTTDTENKDQKKKAAKKLNLLSFGEEAEEEERELAAVKEKIKSSHDVLNDPRLLKEEVPKKELSPSEVKRTRNLQLSVRGTLSSKKEDSQKEPEIDLSSSRDLSDEDEAQFDARMRLQILKKRKELGDHPTRQKLRNESSTPKEDGMPPPSANHEDFDNQPKLEKLSLKKKGIGSEARAERMAKADGDIQLLGHAEQVRQLQKQKKRRLQGREEEVLARLEKFKKTISTKPIAPSGEYGGGEDLSGWTENRLKFTPETSAKDGMTRKNDPDDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGKSLT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00490 495 SUPERFAMILY Cyclophilin-like 14 185 IPR029000 -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 272 329 - -
Eupl09g00490 495 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 19 159 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 MobiDBLite consensus disorder prediction 345 369 - -
Eupl09g00490 495 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 218 IPR044666 -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 240 369 - -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 257 271 - -
Eupl09g00490 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 MobiDBLite consensus disorder prediction 240 256 - -
Eupl09g00490 495 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Eupl09g00490 495 Gene3D - 1 180 IPR029000 -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 177 201 - -
Eupl09g00490 495 CDD cyclophilin_CeCYP16-like 8 180 - -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 416 495 - -
Eupl09g00490 495 MobiDBLite consensus disorder prediction 448 495 - -
Eupl09g00490 495 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
Eupl09g00490 495 Coils Coil 208 235 - -
Eupl09g00490 495 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00490 Eupl-Chr9 12062988 12083609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00490 9 173 U-box Gene Family AT5G67530 47.273 1.83e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00490 K12737 - ming:122067715 732.635