Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00475 ATGGAGCCTCGTGTGGGGAACAAGTTCCGGCTCGGTCGTAAGATCGGTAGCGGTTCGTTTGGGGAGATCTATCTTGGTACTAATATTCAGACAAGTGAAGAGGTCGCCATTAAGCTTGAAAATGTCAAGACAAAGCATCCCCAGTTGCTATATGAATCGAAGTTGTACAGAATCCTGCAGGGAGGAACTGGGATTCCAAATGTGAGATGGTTTGGTGTCGAAGGGGATTATAATGTACTTGTGATGGATTTACTTGGACCTAGTCTTGAAGATCTATTCAACTTTTGCAGTAGGAAATTGTCTCTGAAGTCTGTTCTTATGCTTGCAGATCAGATGATCAATCGAGTTGAATTTGTTCATGCCAAATCGTTTCTACATCGGGATATCAAGCCAGACAATTTCCTCATGGGCTTGGGGAGGCGCGCAAATCAGGTGTACGTCATTGATTTTGGTCTGGCCAAGAAGTACAGAGATACTTCAACCCACCAACACATCCCCTATAGAGAAAATAAGAACTTGACTGGAACTGCCCGGTATGCAAGCATGAACACCCACCTTGGCATTGAACAAAGCCGGAGGGACGATTTAGAATCTCTTGGATATGTTCTTATGTACTTTCTAAGAGGAAGTCTTCCCTGGCAGGGACTGAAAGCAGGAACTAAAAAACAAAAGTATGAGAAAATCAGTGAAAGGAAGGTTTCCACATCTATTGAGGCCTTATGTCGGGGTTATCCTACAGAATTTGCATCATACTTCCATTACTGCCGCTCACTACGGTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGAATATTCCGTGACCTTTTTATTCGTGAAGGTTTTCAATTTGATTATGTGTTTGACTGGACCATTTTGAAGTATCAGCAATCACAGATTGCAACTCCTCCTGCACGTGCTCTTGGTGCCCCTGCTGGAACAAGCTCAGGGATGGCCCCTGCTGTTGTCAATGCTGACAGACAGACAGGCGGTGAAGAAGGAAGACTACCAGGCTGGTCTTCAACAGATCCCTCTCGTAGGAGAGTCTCAGCGCCAGGAATAAATGCAGGAAGCTTATCTAAACAGAAGAGTCCAGTCGCAAATGATTCTGCTGTCACTAAAGATACTATGTTATCTAGTTCCACTTTTTTGGGACGGTCAAGTGGATCATCAAGGCGAGCTGCTGTTTCTAGCAGCCGTGATGCCATGGTCGGAGCGAGTCTGATCCATCTCGCCCTCGAACCACAGAGGCGAGCCCAGGAGTGTTTCGCAAGATTGGAAGTGGGCAGAGAAGTTTACCAGTTGGCTCCTCGGAGCCCAAGCGTACATCTTCTGGTAGGAACACCTCTAACATAA 1356 0.4558 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTSEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFVHAKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISERKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQIATPPARALGAPAGTSSGMAPAVVNADRQTGGEEGRLPGWSSTDPSRRRVSAPGINAGSLSKQKSPVANDSAVTKDTMLSSSTFLGRSSGSSRRAAVSSSRDAMVGASLIHLALEPQRRAQECFARLEVGREVYQLAPRSPSVHLLVGTPLT* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00475 451 CDD STKc_CK1_delta_epsilon 8 282 - -
Eupl09g00475 451 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00475 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Eupl09g00475 451 MobiDBLite consensus disorder prediction 355 371 - -
Eupl09g00475 451 FunFam Casein kinase I isoform delta-like 1 308 - -
Eupl09g00475 451 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Eupl09g00475 451 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Eupl09g00475 451 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00475 451 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl09g00475 451 PANTHER CASEIN KINASE-RELATED 9 359 - -
Eupl09g00475 451 FunFam Putative Casein kinase I 1 85 - -
Eupl09g00475 451 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Eupl09g00475 451 MobiDBLite consensus disorder prediction 327 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00475 Eupl-Chr9 11819504 11837953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00475 7 223 EF-hand Containing Proteins AT2G17890 26.222 2.33e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Eupl09g00475 Pkinase 6.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00475 K02218 - nnu:104586665 739.569