Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00466 ATGGGTCATCATTCGTGCTGTAATAAACAGAAGGTTAGGAGGGGACTCTGGTCTCCTGAGGAAGATGAGAAACTCATTAACTACATTTCCACCTATGGCCATGGCTGCTGGAGTTCCGTTCCAAGACTTGCAGGCTTGCAAAGATGTGGGAAAAGTTGCAGATTAAGATGGATTAATTACCTTAGACCAGACTTAAAACGTGGGAGCTTCACTCCCCAAGAAGCCTCTCTCATCATTGAACTTCACAGAATTCTTGGCAACAGATGGGCTCAGATAGCCAAACATCTACCAGGTAGAACAGATAATGAGGTAAAGAACTTTTGGAACTCAAGCATAAAGAAGAAGCTCATCTCTAATGGTGTTTCTAATCTAACCAGTCTTTCTGATATCTCTATCCCACTTGGTTCTAACGAGGGTTTGTTGTCACCTAATACAAACTCTAATTTCATGATGGGTACCCAACAAGATCATTTATTCCTCCCTAATGCAATGTCAATGATACAAGGTTTTGATCATGGAGATCTTAAAACGGATTTGATCGATTACAATTTAGATTGGGTTATGCCTCCACCATCACAACCCTCTGATACATCTTCGTATGATCCTATATGGTCTTTGGATTATCAGTCTCATCACCACCATCAAGATCATGATCACCAGGGTACTGAGATGTACGGAAACGATGCAAATCCGCATTTTGATGAGAAGTTTACAGTGATGCCTTACAATGATCCACTTGTGGGTCTACAATGCCAAAACTCTGTGAGATCTTCAACGTGGATGAATGTGGCATGCCATCTTCTGGTTCACAAGAAGTTGACACAAGTGCAAGTTAATCAAGTGGAGAAACTCGATTTACCTCCCACTGAGGAAAAAGGATGA 882 0.415 MGHHSCCNKQKVRRGLWSPEEDEKLINYISTYGHGCWSSVPRLAGLQRCGKSCRLRWINYLRPDLKRGSFTPQEASLIIELHRILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLISNGVSNLTSLSDISIPLGSNEGLLSPNTNSNFMMGTQQDHLFLPNAMSMIQGFDHGDLKTDLIDYNLDWVMPPPSQPSDTSSYDPIWSLDYQSHHHHQDHDHQGTEMYGNDANPHFDEKFTVMPYNDPLVGLQCQNSVRSSTWMNVACHLLVHKKLTQVQVNQVEKLDLPPTEEKG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00466 293 FunFam Myb transcription factor 69 116 - -
Eupl09g00466 293 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Eupl09g00466 293 CDD SANT 17 61 IPR001005 -
Eupl09g00466 293 PANTHER MYB DOMAIN PROTEIN 55 1 234 - -
Eupl09g00466 293 Gene3D - 69 116 - -
Eupl09g00466 293 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Eupl09g00466 293 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Eupl09g00466 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Eupl09g00466 293 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Eupl09g00466 293 CDD SANT 69 109 IPR001005 -
Eupl09g00466 293 SMART sant 66 114 IPR001005 -
Eupl09g00466 293 SMART sant 13 63 IPR001005 -
Eupl09g00466 293 FunFam MYB transcription factor 6 66 - -
Eupl09g00466 293 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Eupl09g00466 293 Gene3D - 11 67 - -
Eupl09g00466 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00466 Eupl-Chr9 11670488 11676639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00466 1 118 MYB Transcription Factor Family AT3G13890 92.373 4.76e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl09g00466 Myb_DNA-binding 9.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00466 K09422 - msin:131220000 332.028