Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00465 ATGGATTCTAGAACAGCTTTCTCAGATTCGAACGACAACAGTGGGAGCAGCAGTATCTGTTGCGTCTCCAACACGGAAACCATCTACCCAGAAATTTCCGCCTCGGAAATTTCAACCCTAAGACGCCTCTCCGAAAACCTAGAATCCATCTTCGAATCTCACGAGTACGATTTCTGTAGCGACGCAAAGATGGTTGTCTCTGGTTCTCGCGAAGTCCCCATCCACCGCTGCATTCTTTCTGCTAGAAGTCCCTTCTTCAAGAACGTATTCTCTGGTTCTATTGGGAAGGAGAAGGGTGGGAAACTCGAATTGAAGGAGTTGGCGAAGGATTTCGATGTGGGGTTCGATTCTTTGGTTGCAGTTTTGGCCTATTTGTATAGTGGGAAAGTGAAGCCCTTACCGAAAGGTGTTTGTGTTTGTGTCGACGATGATTGTTCGCATGTGGGGTGTCGGCCGGTGGTGGATTTCATGGTGGAGGTGCTCTATGCTTCTTTCACCTTTCAAATTTCGGAATTGGTTGCTCTTTATCAGCGCCGCCTACTTGACATTCTTGACAAGGTGGCAACAGATGACATATTGGTGATTTTATCTGTTGCAAAATTGTGCGATAAAGCTTGTGAGAGATTGTTGACAGAGTGCATTAAGATTGTTGTCAAGTCTGATATTGATGTCGTAATTCTTGAGAAGGCATTGCCCCACGATGTTGTACAAAGAATAATGGATTCACGTTCAGACCTGGGCTTAGAAGGGCCCGAAAGAAACACTTATCCAGATAAACATGTCAAGAGAATATATAGGGCTCTGGATTCAGATGATGTTGAATTGTTGAGGATGTTGCTCAAAGAGGGGCATACTACTCTAGACGATGCATATGCATTACATTATGCAGTACATTATTGCGATGCAAAAACTACGACGGAGCTTCTGGATCTTGGACTAGCTGATGTTAATCATAGGAATCTGAGGGAATACACCGTTCTACATGTCGCTGCAATGCGGAAAGAACCTAAGATAATAGTGTCTCTTCTGACAAAGGGGGCCCGACCATCTGATCTTACATCAGACGGAAGAAAAGCACTTCAAATCTCAAAGAGGCTCACCAGGTCTATTGACTATTATATGTCTACCGAAGAAGGAAAAGCTTCTCCTAAGGATCGTTTATGCATAGAGATATTGGAGCAAGCAGAAAGAAGAGATCCACTACTAGGAGAAGCTTCTGTTTCTCTTGCAATGGCAGGCGATGATCTTCGAATGAAATTGTTGTACCTCGAAAATAGAGTTGGTCTGGCAAAACTGTTATTCCCCATGGAAGCAAAAGTTGCAATGGACATTGCACAAGTGGATGGAACTCTGGAGTTCTCATTAGCTGTCAATTCCAGGAAGCGTCTTGGGGGCCAGATGACGCCAGTTGACTTGAATGAGGCACCTTTCAAGATGGAAGAGGAGCATCTAAATAGGATGAGAGCGCTCTCCAAAACTGTGGAACTTGGAAAACGCTTCTTCCCTCGTTGTTCGGAGGTACTCAACAAGATTATGGATGCTGATGACTTGTCACAGCTCGCTTACCTTGGAAACGACACCACAGAGGAGCGTCTACTGAAGAGAAAGAGGTACTTGGAACTCCAGGATGTTTTAATAAAAGCATTCAGTGAGGACAAGGAAGAGTTCGATAAGTCTGCTGCTCTGTCATCATCGTCATCGTCAACATCCATAGGAATGGTGAGGCCTAATAATAGTTTCACCCCCAAGAAATAA 1755 0.4439 MDSRTAFSDSNDNSGSSSICCVSNTETIYPEISASEISTLRRLSENLESIFESHEYDFCSDAKMVVSGSREVPIHRCILSARSPFFKNVFSGSIGKEKGGKLELKELAKDFDVGFDSLVAVLAYLYSGKVKPLPKGVCVCVDDDCSHVGCRPVVDFMVEVLYASFTFQISELVALYQRRLLDILDKVATDDILVILSVAKLCDKACERLLTECIKIVVKSDIDVVILEKALPHDVVQRIMDSRSDLGLEGPERNTYPDKHVKRIYRALDSDDVELLRMLLKEGHTTLDDAYALHYAVHYCDAKTTTELLDLGLADVNHRNLREYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQISKRLTRSIDYYMSTEEGKASPKDRLCIEILEQAERRDPLLGEASVSLAMAGDDLRMKLLYLENRVGLAKLLFPMEAKVAMDIAQVDGTLEFSLAVNSRKRLGGQMTPVDLNEAPFKMEEEHLNRMRALSKTVELGKRFFPRCSEVLNKIMDADDLSQLAYLGNDTTEERLLKRKRYLELQDVLIKAFSEDKEEFDKSAALSSSSSSTSIGMVRPNNSFTPKK* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00465 584 CDD BTB_POZ_NPR_plant 41 184 - -
Eupl09g00465 584 Pfam Domain of unknown function (DUF3420) 221 265 IPR024228 -
Eupl09g00465 584 Pfam BTB/POZ domain 54 132 IPR000210 GO:0005515
Eupl09g00465 584 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 233 386 - -
Eupl09g00465 584 MobiDBLite consensus disorder prediction 560 584 - -
Eupl09g00465 584 FunFam Non-expressor of PR1 34 219 - -
Eupl09g00465 584 Pfam NPR1/NIM1 like defence protein C terminal 364 568 IPR021094 -
Eupl09g00465 584 Gene3D - 252 369 IPR036770 -
Eupl09g00465 584 SMART ANK_2a 322 351 IPR002110 GO:0005515
Eupl09g00465 584 SMART ANK_2a 288 318 IPR002110 GO:0005515
Eupl09g00465 584 SUPERFAMILY Ankyrin repeat 254 364 IPR036770 -
Eupl09g00465 584 SMART BTB_4 60 184 IPR000210 GO:0005515
Eupl09g00465 584 SUPERFAMILY POZ domain 48 182 IPR011333 -
Eupl09g00465 584 Gene3D Potassium Channel Kv1.1; Chain A 33 218 IPR011333 -
Eupl09g00465 584 PANTHER REGULATORY PROTEIN NPR3 5 572 IPR044292 GO:0009862|GO:2000022|GO:2000031
Eupl09g00465 584 ProSiteProfiles BTB domain profile. 60 134 IPR000210 GO:0005515
Eupl09g00465 584 MobiDBLite consensus disorder prediction 553 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00465 Eupl-Chr9 11661684 11670335 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Eupl09g00465 NPR1_like_C 1.2e-93 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00465 K14508 - ming:122067358 875.544