Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00464 ATGGAGGGTTTGCATGACATGGGTCCGCCTCCATTTCTCACGAAGACATTCGAAATGGTGGAAGACCCTGCAACTGACTCGGTCGTGTCGTGGAGCAGTGCTCGCAATAGCTTCATTGTCTGGGACTCGCACAAGTTCTCTACCAGTCTTCTCCCCAAATACTTCAAGCACAGTAACTTCTCCAGCTTCATTCGCCAACTCAACACATATGGTTTTAGAAAGGTTGATCCTGATCAATGGGAGTTTGCGAACGAAGGGTTTTTGGGAGGGCAGAAGCATTTGTTGAAGAACATCAAGAGGAGAAGACATGTATCTCGCAACATGCAACAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCTTGTGTTGAATTGGGACAGTATGGGCTGGAAGGCGAAATTGACAGATTGAGTAGAGATCAGAATGTGTTAATGGTGGAAATTAGAAGGATGAGACAGCAACAACAGAATTCAAAGGCACAATTAGTCGCCATGGAAGAACGGTTGCAAGGAACAGAGAGGAAGCAACACCTAATGGTGGCTTTCCTTGCCAGAGCTCTCAGTAACCAGGCTTTTGTCCAACAACTGATTCATCTGAATGAGCAGAGGAAAGAATTGGGTGGTGGTGGAATTGGGAAGAAACGGAGACTGCCCATTAGTAATAGTACAGAGAATTTTCAAGAGGAAGCAATGTTAGCCGCGAATCAGGCCCAAGAAGAAGTGGTGACAATCGAATCGGAGATAGAGACATTATTCTGTGCTGCTATTGATAACGAATCCAGGAGTCCAATTCGAGATCAGAAGACTAATGTGATCCCAGGTGCAAATGATCAAATGTGGGAAAAATTACTGAATGAGGACTTGATCGCTGGTAACGCAGATGGACAAGTCGAAGTAAGAGATCAATCTGAAATTGATTGGGGGGAAGATGTACAAGACTTAGTGGAGCAAATGGGGTACCTTGGATCGAAGCGGTGA 978 0.4591 MEGLHDMGPPPFLTKTFEMVEDPATDSVVSWSSARNSFIVWDSHKFSTSLLPKYFKHSNFSSFIRQLNTYGFRKVDPDQWEFANEGFLGGQKHLLKNIKRRRHVSRNMQQRGGGGGGGGGACVELGQYGLEGEIDRLSRDQNVLMVEIRRMRQQQQNSKAQLVAMEERLQGTERKQHLMVAFLARALSNQAFVQQLIHLNEQRKELGGGGIGKKRRLPISNSTENFQEEAMLAANQAQEEVVTIESEIETLFCAAIDNESRSPIRDQKTNVIPGANDQMWEKLLNEDLIAGNADGQVEVRDQSEIDWGEDVQDLVEQMGYLGSKR* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00464 325 FunFam Heat shock transcription factor 1 5 102 - -
Eupl09g00464 325 Gene3D - 5 102 IPR036388 -
Eupl09g00464 325 SMART hsfneu3 8 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 ProSitePatterns HSF-type DNA-binding domain signature. 51 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 SUPERFAMILY "Winged helix" DNA-binding domain 8 101 IPR036390 -
Eupl09g00464 325 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 228 IPR027725 -
Eupl09g00464 325 Pfam HSF-type DNA-binding 12 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl09g00464 325 Coils Coil 134 175 - -
Eupl09g00464 325 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00464 Eupl-Chr9 11651616 11653668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00464 1 324 HSF AT2G26150 53.191 1.67e-119 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl09g00464 HSF_DNA-bind 3.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00464 K09419 - nnu:104600682 434.876