Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00455 ATGGACGCGGTCTTCTTCCTTGATGAAGAAGCCCGTGCCCGTTTCATCAGAACATTAGCAGAAACAATTGGTTGCACCTACCTTTGCTTATGGTCCTATTATCCCCTTACATCCAACGTTTTATTGTCCATGGGAGGGTGGTACAATGACGAAAGCAACCAGCCCAGTTCTTCATCTGGAAGTCTCGCTCGGAGGTTCTTCAATGCTTATCTACAAACATCATGCACTATCGAAAATGGTTTCAGCTGTGTCCCGGGACTTGCTTTTAAGGAAGGGATTCCCTATATAGAATTGAAGGAATTGGAGCTTATGGGTCGGGCTTCGACCGATACTCAACGACAATTCTATCAGACTGCGGCATTCATGGGGTGCAAAAGTGGAGAGATCGAGATAGGAATGTCAAATATAATTAGTCGGCAGATTAACATGGAAATGGCGATGAAGAACTGGTTTCCTGAAGACTTCTCTCAACAGTCTCAATTCAAAGAGCCTCCTCGCCAACCCGATCAGAACCGGCCTTCATCGTCTTCTTCATCATTGAGATCATTATCTGTGGGTAGTCCGGAATATTCATCTCTTTTGTTCAGCATGCCGAGTAGTTCTTACATGCCCGAATCCCGAAAGGAAGCACCAATTGAGCAAGCAATTAGACCAACAACCATACCAATTCTACCACACCAACAAACCATGCAAACCTACAATCGGCTTCGTAACATTCAGTTTCCAAATCCGGAGAGTGACGATGCGGCAATGACAAGAGCCATGCTCGCCGTTATATCTTCTCCATCTTCTTATCAACCCCAACAAAATCAAACCTACAGTTCTCAAGTAAGCCGAGAAACAAGTGCTTTTAAGAAATATATCTCTGTACTAGCCCCAAAGGTCCAAATGAAAGCCAATTCGCGCAAGCAAAATTTGTTGAAACGCGCAATTAGATTCTTTAGTGATTTGAATTTAAGGAATACAATTGAAGCACAAGCACATGGAAACCGCCCGCCAACAAGCACTCAGTTGCACCATATGATGTCCGAGCGCAAGCGGCGAGAGAAACTCAACGAGAGCTTTCAGGCATTGAGATCGCTACTTCCTCCTGGTTCCAAGAAAGACAAAGCGTCGGTGCTCTCTAATACTAGGGATTACCTGAGTGCTCTGAAAGCTGAAGTTTTTGAGCTCAAACAAAAGAACCAGCTATTGGGAGCACGACTTTCGCCTTCAAGAGAAGCTAGTAAAGAAGCTGGTGGTTCTTCAAATGAGAGAGTTGACATTCGGATTACTCAAGCTTCCGAATCAACATCTGAAGAGAGAGAAATCGATCTGCGAGTGACTGTGAGGGGAGATTCTAATGTTATGGATTTGATTATCCACATTCTTGAATTCCTAAAACAGGTGAAGGATGTTAGCCTGGTATCCATGGAAGCAGACACCCAGCTGCAACAAACGAATTCATTCAACCGAGTAATCTTAAGATTGAAAATCCAGGGGAACGAATGGGACGAGTCGGCCTTCCGAGAAGCCATTACAAGGGTTGTTGATGACTTGGCACGGTGA 1548 0.4457 MDAVFFLDEEARARFIRTLAETIGCTYLCLWSYYPLTSNVLLSMGGWYNDESNQPSSSSGSLARRFFNAYLQTSCTIENGFSCVPGLAFKEGIPYIELKELELMGRASTDTQRQFYQTAAFMGCKSGEIEIGMSNIISRQINMEMAMKNWFPEDFSQQSQFKEPPRQPDQNRPSSSSSSLRSLSVGSPEYSSLLFSMPSSSYMPESRKEAPIEQAIRPTTIPILPHQQTMQTYNRLRNIQFPNPESDDAAMTRAMLAVISSPSSYQPQQNQTYSSQVSRETSAFKKYISVLAPKVQMKANSRKQNLLKRAIRFFSDLNLRNTIEAQAHGNRPPTSTQLHHMMSERKRREKLNESFQALRSLLPPGSKKDKASVLSNTRDYLSALKAEVFELKQKNQLLGARLSPSREASKEAGGSSNERVDIRITQASESTSEEREIDLRVTVRGDSNVMDLIIHILEFLKQVKDVSLVSMEADTQLQQTNSFNRVILRLKIQGNEWDESAFREAITRVVDDLAR* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00455 515 SMART finulus 341 390 IPR011598 GO:0046983
Eupl09g00455 515 CDD bHLH_AtbHLH_like 340 391 IPR045239 -
Eupl09g00455 515 Gene3D - 335 408 IPR036638 GO:0046983
Eupl09g00455 515 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 107 512 IPR044658 -
Eupl09g00455 515 Pfam Helix-loop-helix DNA-binding domain 339 384 IPR011598 GO:0046983
Eupl09g00455 515 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 403 IPR036638 GO:0046983
Eupl09g00455 515 MobiDBLite consensus disorder prediction 156 184 - -
Eupl09g00455 515 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 335 384 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00455 Eupl-Chr9 11425137 11429011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00455 1 514 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 43.376 6.57e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl09g00455 HLH 4.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00455 - - nnu:104600698 569.311