Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00453 ATGATTAAGGGTTTGATAATCCAGCATCCAGTTATGGAGGAGAATATGTCTAATTTGACTTCTACATCTGGTGAAGCAATTGTTTCTTCAGGCAACAGAGCTGAAACTGGCACCATGTACCCACAACAGTCCTTTGCTTCACCACAGCAAACTCAAACTCCAGCAATGAAGAAGAAGAGAAACCTTCCAGGAAATCCAGACCCAGATGCAGAAGTGATAGCTTTATCACCAAAGACTCTCATGGCGACGAATCGATTTGTGTGTGAGATCTGTAACAAAGGGTTTCAGAGAGATCAGAACCTTCAGCTTCATAGGAGAGGACATAACCTACCATGGAAGCTAAAGCAGAGAACAAGCAAAGAGATAAGGAAGAGGGTGTATGTGTGCCCAGAGCCTACTTGTGTGCACCATGACCCATCAAGGGCTCTTGGAGACCTCACAGGAATCAAGAAGCATTTTTGCAGAAAGCATGGTGAGAAGAAGTGGAAATGTGACAAATGTTCAAAGCGTTACGCAGTTCAATCAGATTGGAAAGCTCACTCCAAGACTTGTGGCACAAGAGAGTACAGATGTGACTGTGGAACCCTTTTCTCAAGGAGGGATAGTTTCATCACTCACAGAGCCTTTTGTGATGCTTTAGCAGAAGAGAGTGCAAGAGCAATCACAGCAAACCCACTTCTCTCCTCTCAACCTGGAATTTCAACACCACACATAAACCTGCAACCCCAATTCAATAGCCATGATCTGCAAGCAATCTCACTCAAAAGAGAGCAACAACAACAACAACATTTCAATCTAAGACCTGATATACCACCATGGTTATCTTGCCCACCTGTTGTAGGAGCAGATCCAGGCCCACCTCCTATGGATCTCTCCTCATCAATTTTCTCTAATCAAGAATTCTCACAAACCCAAGCTTCAATCCACCATGAAAACTCTAACCCTAACCCTAGTCCTACTCTTCCTCCTTACCATCCCTCAACCTCTCCACACATGTCTGCAACTGCATTACTGCAAAAAGCAGCTCAAATGGGTGCAACCATAAGCAAACCTTCTTCATCATCAGCCATGATCAGACCCCACCATGCTCACATGTTTGCTAATACTGGTAACCCTAGTACTACATCTGTTACTACAACTACAACTGGTTTTGGTCTGGGTTTGTCTTCACGTGAAGAGATGGAAAGTGGGTTTATTCATAATTTTGGGAATAAAGCTGCTGTTGCAGCTTCTGGTCTTATGGCCCATGTATCTGCAACTGCAGGAGTAGGAACTCCTTCTCTACTTCAAGACATGGTGAGTTCTCTCTCTTCTGCAAGTGGCGGATTTGATGGATCTTGCTTTGAAGATGCCTTTGGTGGTATGTTGAATTCAAACAGAGATGGAAACCCTAATGAGAATCACTCATCAAAAACAAGAAATGATCATGAAGGTGGTGGTGGTGGTAATGGAAATGATGGGTTGACTAGAGATTTCTTGGGTCTTAGATCATTTTCTCATAGAGACATTCTCAACATAACTGGGTTCAGTCAGTGCATGAGCTCTTCACCTTCGCAGAATCAGAATAAAAAACCATGGCAAGGTTAG 1587 0.4348 MIKGLIIQHPVMEENMSNLTSTSGEAIVSSGNRAETGTMYPQQSFASPQQTQTPAMKKKRNLPGNPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITANPLLSSQPGISTPHINLQPQFNSHDLQAISLKREQQQQQHFNLRPDIPPWLSCPPVVGADPGPPPMDLSSSIFSNQEFSQTQASIHHENSNPNPSPTLPPYHPSTSPHMSATALLQKAAQMGATISKPSSSSAMIRPHHAHMFANTGNPSTTSVTTTTTGFGLGLSSREEMESGFIHNFGNKAAVAASGLMAHVSATAGVGTPSLLQDMVSSLSSASGGFDGSCFEDAFGGMLNSNRDGNPNENHSSKTRNDHEGGGGGNGNDGLTRDFLGLRSFSHRDILNITGFSQCMSSSPSQNQNKKPWQG* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00453 528 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Eupl09g00453 528 MobiDBLite consensus disorder prediction 35 67 - -
Eupl09g00453 528 SMART c2h2final6 127 157 IPR013087 -
Eupl09g00453 528 SMART c2h2final6 86 108 IPR013087 -
Eupl09g00453 528 SMART c2h2final6 162 182 IPR013087 -
Eupl09g00453 528 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
Eupl09g00453 528 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 41 515 IPR031140 -
Eupl09g00453 528 Gene3D Classic Zinc Finger 140 220 - -
Eupl09g00453 528 FunFam protein indeterminate-domain 12-like 65 133 - -
Eupl09g00453 528 MobiDBLite consensus disorder prediction 457 488 - -
Eupl09g00453 528 Gene3D Classic Zinc Finger 65 132 - -
Eupl09g00453 528 MobiDBLite consensus disorder prediction 302 331 - -
Eupl09g00453 528 MobiDBLite consensus disorder prediction 35 58 - -
Eupl09g00453 528 FunFam protein indeterminate-domain 5, chloroplastic-like 140 219 - -
Eupl09g00453 528 SUPERFAMILY beta-beta-alpha zinc fingers 85 182 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00453 Eupl-Chr9 11372489 11376074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00453 12 349 IDZ Gene Family AT1G55110 58.427 5.98e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl09g00453 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00453 K25870 - nnu:104586641 793.112