Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00444 ATGAGCGTCCCTAGGGGACCCACCACCTCCGGCACCCAGGCTTGCGCTGCGTGTAAATACCAACGGAGGAAATGCAGTCCCGATTGTTCTCTCGCTCCTTATTTTCCTCCCCATCATCAAAGACAATTCATCAACGCCCATAAACTCTTTGGCGTAAGCAACATCCAGAAAATCATCCGCGATCTTGATCCTTTAGAGAAGGACGAAGCCATGCGTACCATGATTTTCCAAGCAGATGTTCGTGCGAACGATCCAGTAGGTGGATGTTATAGGATAATTCATGATCTTCAACGACAGATCGAACATGATAAGGCCGAGCTCGATTTTGTTCTTCACCAGCTTGCTATTTGTCGTGCGCAAGTTCAACAAGCTAATGTTATAATGGATCCGGATCCATTGAATTCTTATATGCATCTTCCTATTCATCATCTTCCTCAGCATCAACATCAGCATCAGCATCAGCTGCAGCAGTTCTTTGTTCATGATAATCATCATCAAGGTCTTAATCAATGGACCATGCAGGATCCTAGTGGTCCGTCTTCTTCTTTGCATGTTAAGCAATTACCCTTTCTTAATGAATGCGAGGACATTAAACCCCTTCTTGAAATGTTTGATGAAAGGCAATCACTCCCTTTCGATTCCAAAGAATCAATCGAATGCAGCGACAAAGTTGTGCTAAAAGAAGAGCTCGACGCGATGGTGCAGAAAGAAGAAGAGACAAACTCCTTGGAACTTCTTCAAGAGCATGATTTGGATTTGAAGGGAGCGGCTTCTTTATTTACTCTCACAAACTGTAATACCTGA 804 0.4378 MSVPRGPTTSGTQACAACKYQRRKCSPDCSLAPYFPPHHQRQFINAHKLFGVSNIQKIIRDLDPLEKDEAMRTMIFQADVRANDPVGGCYRIIHDLQRQIEHDKAELDFVLHQLAICRAQVQQANVIMDPDPLNSYMHLPIHHLPQHQHQHQHQLQQFFVHDNHHQGLNQWTMQDPSGPSSSLHVKQLPFLNECEDIKPLLEMFDERQSLPFDSKESIECSDKVVLKEELDAMVQKEEETNSLELLQEHDLDLKGAASLFTLTNCNT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00444 267 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Eupl09g00444 267 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 153 - -
Eupl09g00444 267 Pfam Lateral organ boundaries (LOB) domain 14 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00444 Eupl-Chr9 11227420 11233361 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00444 13 207 AS2 family AT3G13850 47.642 1.78e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl09g00444 LOB 2.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00444 - - tss:122668761 306.605