Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00443 ATGAGTGAAAACAGTGGTAATGGCACTAACCATGCTTGTGCATCATGCAAGTATCAAAGGAAAAAGTGTCATGAAAATTGTTTTTTAGCCCCTTATTTCCCTGCTAATAAGTCTCAGGATTTTCTTAATGCTCATAGACTTTTTGGCATAAGTAACATCACAAAGATATTAAACTCGCTCGAGCCTGATCGAAGAAACGCCGCTGTTCAGACGATAATCGTTGAAGCCAATGCAAGGAGGGATGATCCTGTTCATGGATGTTTAGGCGTTATTCGCAAACTCCTTTCTCAAATTGAAGTTCAACGTCGAGAGCTCGATATCATCAATCAACAGATCTCGTATTGCCGACAGAGAGAACAACTGTTGCAGCAACAAAATTTGCAACTGTTCTTAAATTCATTGTCACCCTCATCCTCATCTTTGCCATTACTGCAACAATTTGGTAGCGGCGGCGGCGATTACCAGCCACCTCCCCCACAATCCAATGAAGAAACATATAATATAGGAGACATGAGGAACCTGGATTCAAGATACAGTTATTATCAATCGCTTCAGGAATACGAAGATATCAAGCCCTTCGATGTTAAATTCATTGATCAAATTGCGGATTCTTATCACCATAAGAAGGCTATTATAAAATTCAGAGATGCTGAAGAATCAAGCATAACCCAATCTGATAGGGGCCACCCATTGGCATTAGCGTGTAGCAGCGGCTTTAGTATCAATAGTGACATTCCAATTAAGACGAATCTCTGTTTCTAG 762 0.4042 MSENSGNGTNHACASCKYQRKKCHENCFLAPYFPANKSQDFLNAHRLFGISNITKILNSLEPDRRNAAVQTIIVEANARRDDPVHGCLGVIRKLLSQIEVQRRELDIINQQISYCRQREQLLQQQNLQLFLNSLSPSSSSLPLLQQFGSGGGDYQPPPPQSNEETYNIGDMRNLDSRYSYYQSLQEYEDIKPFDVKFIDQIADSYHHKKAIIKFRDAEESSITQSDRGHPLALACSSGFSINSDIPIKTNLCF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00443 253 Coils Coil 91 111 - -
Eupl09g00443 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 140 - -
Eupl09g00443 253 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Eupl09g00443 253 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Eupl09g00443 253 MobiDBLite consensus disorder prediction 146 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00443 Eupl-Chr9 11221366 11223429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00443 12 133 AS2 family AT3G13850 49.242 5.44e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl09g00443 LOB 1.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00443 - - msin:131223997 183.341