Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00436 ATGTCTGAGGCTCCACCTGGAATTTCAGATTCGACTGGTAGTGATCCTATATTATCAGAGTTGGTTGCGGAGATCAAGCCTCGGTATCATATTGCAGGTACTAAAGGTGTATTTTATGCACGCGAACCATACTCTAATGCTGAGGCTGTGCATGTAACCCGCTTCTTGGGTCTTGCACCTGTTGGGAACAAGGATAAACAGAAATTTATTCATGCGATTTCTCCTACTCCAGCATCTACTATGTCTGCTGCCGAGATCTGTATGAAGCCGCCAAACACAACCTTATCCCCATATACAGTTGTAGAGAAAACAGTTCATGCTAAGGAAGCAGGAAAGCGACCTAGCAATAGTGATTCTGACACACAATATTGGCGCTATGATGTATCTCAAAAGCGGCAGAGGCAGGGAGGTGGCGATGGTGAGAAGCTTTGTTTCAAATTTACGTCTTCGGGATCTTGTTCACGAGGCGAAAAATGCAACTTTCGGCATGACATGGATACGAGGGAGCAATATTTGCGAGGTGTTTGTTTTGATTTCCTTAGTAGAGGAAAATGTGAACGGGGTCCTGATTGCAACTTTAAGCATAGCTTAGCAGAGAAAGATGAGAGCATTTCTCATGGGAGACAGAACACTGGAAGGTCTAAGGATTGCTGGTTCTGTTTGTCGAGCCCCAATTTGGAGTCGCATCTCATCATAAGCATAGGAGAAAATTACTACTGTGCACTAGCCAAGGGGCCACTAGTTCAAGACCATGTACTGATTATACCTGTTGAGCATTCCCCTAATACTTTTTCTCTAGCCCCGGAAGCAGAGATAGAGCTAGAAAGATTCAAAAGTGCTCTGAAGATTTATTTCAAGAACCAGGGAAAGGAAATTGTTTTCTTTGAGTGGGTATTCAAACATGGTACTCATGCTAATCTTCAGGCTATTGCCATTCCTTTGTCTAAAGCACCTGCTGTTCAAAAGATTTTTAATATGGCTGCTGAAAAGTTGGGATTTAAATTTGTAGCCTTGAACAATGAAAATTCTGAAGGTAGAAAATTATTGAGGACACAGTTTGACAGAAAATTGAGTTTCTTTTATGTGGAACTCCCAGAAGGAACAATACTATCACATTCTGTTGAGGATAATGAGAAATTCCCAGTCCAATTTGGACGTGAGGTTCTGGCAGGCTTGTTGAATGTGCCAAATAGGGCTGATTGGAGGAATTGTAAGCTTAGCAAAGAAGACGAAATGAAGATGGCAGAGACTTTCAAGAAGCAATTTGAAGAATTTGATCCAACTCACTGA 1290 0.4194 MSEAPPGISDSTGSDPILSELVAEIKPRYHIAGTKGVFYAREPYSNAEAVHVTRFLGLAPVGNKDKQKFIHAISPTPASTMSAAEICMKPPNTTLSPYTVVEKTVHAKEAGKRPSNSDSDTQYWRYDVSQKRQRQGGGDGEKLCFKFTSSGSCSRGEKCNFRHDMDTREQYLRGVCFDFLSRGKCERGPDCNFKHSLAEKDESISHGRQNTGRSKDCWFCLSSPNLESHLIISIGENYYCALAKGPLVQDHVLIIPVEHSPNTFSLAPEAEIELERFKSALKIYFKNQGKEIVFFEWVFKHGTHANLQAIAIPLSKAPAVQKIFNMAAEKLGFKFVALNNENSEGRKLLRTQFDRKLSFFYVELPEGTILSHSVEDNEKFPVQFGREVLAGLLNVPNRADWRNCKLSKEDEMKMAETFKKQFEEFDPTH* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00436 429 SUPERFAMILY CCCH zinc finger 173 199 IPR036855 GO:0046872
Eupl09g00436 429 Gene3D - 137 206 - -
Eupl09g00436 429 SUPERFAMILY HIT-like 215 305 IPR036265 -
Eupl09g00436 429 SUPERFAMILY CCCH zinc finger 142 168 IPR036855 GO:0046872
Eupl09g00436 429 Gene3D - 210 310 IPR036265 -
Eupl09g00436 429 Pfam Protein similar to CwfJ C-terminus 1 208 324 IPR006768 -
Eupl09g00436 429 ProSiteProfiles Zinc finger C3H1-type profile. 170 198 IPR000571 GO:0046872
Eupl09g00436 429 SMART c3hfinal6 172 197 IPR000571 GO:0046872
Eupl09g00436 429 SMART c3hfinal6 138 165 IPR000571 GO:0046872
Eupl09g00436 429 ProSiteProfiles Zinc finger C3H1-type profile. 138 166 IPR000571 GO:0046872
Eupl09g00436 429 Pfam Protein similar to CwfJ C-terminus 2 347 428 IPR006767 -
Eupl09g00436 429 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 2 428 IPR040194 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl09g00436 CwfJ_C_1 1.8e-35 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00436 K24939 - nnu:104600712 702.205