Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00412 ATGACTCCTCTCTATCCGAATCCACCACCATCTCCTTTTCCTCCTATTGATCTCAATGAAGATCAGCACCTACTCTTTAGTCCAACATCTCAAGCTTCTTCTTCTCTCTCATGTCCTATTTTTTTCAACCCAACTCAAGATCAAGGAGGAAGTTACAACAGAGAAGAACAACAGGAGGCCGATAAGTACATTTCGCTTAGTGGATCAAGTGATCATCAATTCCTCCCATCTCCTTTACTTCCAACTGTGGAGACAGACAGTAACTATGGCCTCAAATTATCCATTTGTAAACAAGAGGACAACCAAAGTGATAATGGGTCTGTTAAGTGGATGTCTTCAAAGATGAGGTTGATGAAGAAGATGAATTCTAATCAAATGGTCACTGGCAAACCGGTAAGGAGTATGCAGAAGCTTCAAGATCAAGAACAACCATCCTCGCCTTTTGATATCGAAAACAGTAACAACAGCACTATTAGAGTCTGTTCCGATTGCAACACAACTAAGACCCCTCTTTGGAGGAGTGGCCCTAGAGGTCCCAAGTCACTTTGCAACGCCTGTGGAATTCGACAACGGAAGGCAAGACGTGCCATGGCAGCAGCCGCAGCAGCGGCAAGTGGTACACTTCTTTCCACTGATACATCATCTATGCGGAGTAAGGTGCAACACAAAATGAAGAGATCGGATACTGGCTATATAACGCAATACAAGAAACGGTGCAAACTCGAGGCCCCTCCTAGTAGCAGAAAGAAACTTTGTTTTGAGGATTTCACTATAAGTTTGAGTAAGAATTCAGCTTTTCATCGCGTGTTCCCACAAGATGAGAAGGAAGCTGCAATCCTGCTAATGGCTTTGTCTTATGGCCTTGTTCATGGTTGA 876 0.4361 MTPLYPNPPPSPFPPIDLNEDQHLLFSPTSQASSSLSCPIFFNPTQDQGGSYNREEQQEADKYISLSGSSDHQFLPSPLLPTVETDSNYGLKLSICKQEDNQSDNGSVKWMSSKMRLMKKMNSNQMVTGKPVRSMQKLQDQEQPSSPFDIENSNNSTIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAASGTLLSTDTSSMRSKVQHKMKRSDTGYITQYKKRCKLEAPPSSRKKLCFEDFTISLSKNSAFHRVFPQDEKEAAILLMALSYGLVHG* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00412 291 MobiDBLite consensus disorder prediction 1 21 - -
Eupl09g00412 291 CDD ZnF_GATA 160 192 IPR000679 GO:0006355|GO:0043565
Eupl09g00412 291 Gene3D - 150 231 IPR013088 GO:0006355|GO:0008270
Eupl09g00412 291 FunFam GATA transcription factor 21 155 233 - -
Eupl09g00412 291 MobiDBLite consensus disorder prediction 1 16 - -
Eupl09g00412 291 SMART GATA_3 155 206 IPR000679 GO:0006355|GO:0043565
Eupl09g00412 291 Pfam GATA zinc finger 161 194 IPR000679 GO:0006355|GO:0043565
Eupl09g00412 291 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 155 195 - -
Eupl09g00412 291 ProSiteProfiles GATA-type zinc finger domain profile. 155 191 IPR000679 GO:0006355|GO:0043565
Eupl09g00412 291 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 291 - -
Eupl09g00412 291 ProSitePatterns GATA-type zinc finger domain. 161 186 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00412 Eupl-Chr9 10765904 10768565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00412 91 291 C2C2-Gata Transcription Factor Family AT4G26150 41.597 2.42e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Eupl09g00412 GATA 4.6e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00412 - - vri:117924576 313.923