Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00399 ATGGATGCCCAAGATAATGGAAGCTATCTCTCAGGGTTAGGCTTGTCCCGTTTGATATGCCTTCCAATGGCTTTGAGAGCTGCAATTGAGCTAAATGTGTTCAAAATCATCGGACAATCCGGTCCAGGAGCTCAACTTTCTCCATCGGAGATGGTCGCAAAGATGACGACGAACAATCCGAATGCAGCGATTGCCTTGGAGCGAATACTTCGAATGCTAGGTGCAAGCTCCATCCTCTCCGTTTCTCTGAGGCCATGCACCGACGGCAAGAAGCCCGAGAGGGTCTACGGTTTAACGAGCGAGTCGCGTTGCTTAGTACCTAGTGAAGACGACGTATCGGTGGTGCCGATGCTGTTATTCACCTCCGATAAGTCGGTTGTGGAGAGCTTTTATCAGCTTAAAGATGTTGTGCTCGAAGAAGGGTGTGTGCCGTTTGATAAGGCTCATGGTGTTAATTTCTTCGAGTATGCGGGTAAGGAGCCTAGTGTGAACAAGGTGTTCAATCAAGCCATGGGGACTAGCTCCACCATTTGTTTCGACGAGGTGTTTAAGGTGTACAGAGGCTTCCATGATATGAAAGAGCTGGTAGATGTTGGTGGTGGCATTGGAACTTCGCTTAGTAACATAGTAAATAAGTACCCAAACATCCGTGGGATCAATTTTGAGTTGTCTCACGTTGTTGCTGATGCACCTAACTATCCAGGTGTGGAGCATGTTGCAGGAGATATGTTTGAGGGGGTACCAGAGGCTGAAAACATTTTGCTCAAGTGGGTGCTTCACGACTGGGACGACGATCGGTGCATGAAGTTGCTAAAGAATTGCTGGAAGGCATTGCCTGATGGTGGGAAAGTGATAGTGATTGAGTTTGTTCTCCCTGCAAAACTAGGAAACAATGCTGAGTCCTTCAATGCATTAACTCCCGATCTCCTTATGATGGCATTGAATCCTGGTGGCAAGGAGCGGACAGCCGTTGAATATGGTGATCTAGCAAGTGCAGCTGGGTTTGCTGAAACGAAGTCTTTCCCGATTGCACAAGGCCTTCATGTCATGGAATTCCACAAATAA 1065 0.4761 MDAQDNGSYLSGLGLSRLICLPMALRAAIELNVFKIIGQSGPGAQLSPSEMVAKMTTNNPNAAIALERILRMLGASSILSVSLRPCTDGKKPERVYGLTSESRCLVPSEDDVSVVPMLLFTSDKSVVESFYQLKDVVLEEGCVPFDKAHGVNFFEYAGKEPSVNKVFNQAMGTSSTICFDEVFKVYRGFHDMKELVDVGGGIGTSLSNIVNKYPNIRGINFELSHVVADAPNYPGVEHVAGDMFEGVPEAENILLKWVLHDWDDDRCMKLLKNCWKALPDGGKVIVIEFVLPAKLGNNAESFNALTPDLLMMALNPGGKERTAVEYGDLASAAGFAETKSFPIAQGLHVMEFHK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00399 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Eupl09g00399 354 Pfam Dimerisation domain 23 73 IPR012967 GO:0046983
Eupl09g00399 354 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Eupl09g00399 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Eupl09g00399 354 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
Eupl09g00399 354 SUPERFAMILY "Winged helix" DNA-binding domain 13 108 IPR036390 -
Eupl09g00399 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 13 354 IPR016461 GO:0008168
Eupl09g00399 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 351 IPR029063 -
Eupl09g00399 354 Gene3D - 1 105 IPR036388 -
Eupl09g00399 354 PANTHER O-METHYLTRANSFERASE 18 337 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00399 Eupl-Chr9 10601004 10602620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00399 5 354 Monolignol Biosynthesis Gene Families AT5G54160 44.571 5.59e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00399 K13397 K13066 ag:BAA06192 553.132