Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00390 ATGCAGATCGAAGAGGGAGACCCAGATCAAGATATGAGATGCCAAGCCCAAGTGTTGGACTACATTTGCGGCATTGTTGATTCAGTAGTTCTCAAATCTGCCATTGATTTAGGCATCTTCGATACCATCCACAACACCACCACCAAAGAAGGCAAGCCCAAGCCCATCACTCTCTCCACACTAACAGGTTCTCTCCCCTTAGCTTCCATTAAGACCCACAACCTGTATCGCTTACTAAGATACTTGGTCCACATCAACCTCTTAACCATTCATGTTGTTGAAGAAGATGAAACATTCTCATTGACAGAGCTAGCTAAATTACTCCTCAGAGATAAAGAAAGGAGTCTAGTCGATTGGGCATTGGCGATCATCGACGAGACCTCGATCAGCGGTTGGCATCAGTTGAGTAGTTGTTGTTCCTTGCCGACAAATGGGCCGACGCCATTCGAAATGGTGCATGGGAAGAGTGTGTGGGAATTGGCTAAGGAGAGCCCGGAAGTGAACCAACTTATCAATGATGCCATGGCATGCGACACGAGGTTAGTCATGCCAGCATTTGTCCAAGGTTGTGATAAGGTGTTGAATGGAATTACGTCGTTGGTAGATGTCGGCGGTGGCACCGGTGCTGCCATGAGTTACGTCGTCAAGTCTTTCCCTCAGGTGAAGTGTACGGTCTTTGATTTACCTCATGTCATAGCCTCGTCGCCGCAGTATCCCGGTGTCGACATGATTGGAGGCGACATGTTCGAATTCATCCCCGCTGCTGATGCTGTTTTATTGAAGTACATGCTCCATAATTGGCAGGACGGAGAATGCATCAAGATACTGAAGAAATGTAAAGAAGCCGTTCCGAGGGAGCAAGGGAAGGTGATCATAATGGACATCGTGATGGATCGAGACGAGGATGACGACGATGTAATACAAGCGAAGATAAGTCTCGATTTGGACATGATGGTGAGCTCAGGAGGTAGGGAGAGGACTGAGGAGGAATGGAGAGTGCTCCTTGACAAGGCTGGTTTCAGGGGACATGAAATAATTCCCATTTTCGCCATACAATCAGTTATTGTGGCATATCCTTAG 1080 0.4741 MQIEEGDPDQDMRCQAQVLDYICGIVDSVVLKSAIDLGIFDTIHNTTTKEGKPKPITLSTLTGSLPLASIKTHNLYRLLRYLVHINLLTIHVVEEDETFSLTELAKLLLRDKERSLVDWALAIIDETSISGWHQLSSCCSLPTNGPTPFEMVHGKSVWELAKESPEVNQLINDAMACDTRLVMPAFVQGCDKVLNGITSLVDVGGGTGAAMSYVVKSFPQVKCTVFDLPHVIASSPQYPGVDMIGGDMFEFIPAADAVLLKYMLHNWQDGECIKILKKCKEAVPREQGKVIIMDIVMDRDEDDDDVIQAKISLDLDMMVSSGGRERTEEEWRVLLDKAGFRGHEIIPIFAIQSVIVAYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00390 359 Gene3D - 2 108 IPR036388 -
Eupl09g00390 359 Pfam Dimerisation domain 30 83 IPR012967 GO:0046983
Eupl09g00390 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Eupl09g00390 359 Pfam O-methyltransferase domain 143 341 IPR001077 GO:0008171
Eupl09g00390 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Eupl09g00390 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 359 IPR016461 GO:0008168
Eupl09g00390 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
Eupl09g00390 359 FunFam O-methyltransferase ZRP4 110 359 - -
Eupl09g00390 359 PANTHER O-METHYLTRANSFERASE 28 340 IPR016461 GO:0008168
Eupl09g00390 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00390 Eupl-Chr9 10341353 10342734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00390 30 359 Monolignol Biosynthesis Gene Families AT1G51990 29.290 5.84e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00390 - K13383 psom:113348043 462.996