Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00378 ATGTCAACTGAGGACCTCCAAGGTATTTTCAATTTTCCAGAGGGGTGTTTTCGTTTTGGAAACCTTTTCAAAAGATTTAAGCACTCGATGAAATCTAAAGCTGAAGTGTACAACGGTCATGTTAGGGCAATGGGAGCGACCGAGATCTCCTCCACCCCCAGGTTGAAGAGAGAGGAGTGTAAACGCACCAAACACGACTCTGTTTTCTCCAAATGGCAGATTCTCATTGGACCTACTGATTGGGAAAACTTTTCATTGGGCAAGGATGGAATAGAGAGATATAGGATACAAAACCTCCCAGTGAGTTCTTCATGTCCAGGACTGTATGAACTTGGCATAGCTGCATCTCACACTGTGTTAGGCCGTGATGTACGTAAGCTTGATCAGGATCGTATAGTCGTCGTTTACCTTGGACAAGCTGACAATGTTAGGACAAGACTCCAGCATTATGGGAGGGCAGGTTCTCATTTGGACCATGGTAACTCGGTCTTAGTTGGCCATCCAAATGAAAGTTCCTGTTTCCAAAGAGGACCTGGATTGTTTAGGGAGATATTCTCCAGGGGCTTTCCTATCATGTTTAGATGGGCTCCGTCATTCTTGAACGTTGTACAGATGGAAAACAAGAAGGAAGCTGAGAAAACTGAAGTTCAGCTGCTTGGCATCTTTGATTATGCATGGAATAAAGGTGGGAATGGTGTCCGTCGTCCCAACGATATCCTACTAAAACTTGATAAAATTACTTCAAGCACCACACCATTTCCTAATATTGCTAGAAAGCTCCAGCAGTGGATGTGGGACCACGCTTTTGGTCTGATCCAAGAGGGGATCAAGATTAAAGCAAGCAAACTGGCGTCAACAAGGGCCCAATCCAGTACTTGTAGTGATTGGGAAAGTGAAAATCTCCGTTCTCAAATTTTCAAGTTTGGCAGATCACAGCCTCGGATAGTCTTGGATAAGTACGTTGTCAATGAGGACCATACTACTATTTGTGGGGTTGCCATAGGTGAGGGGTTTGTTTGTACAAGGAGACCAGTTGAAGGAAGAAAAAGGTGTGGGGAGCATAAAGGGAAGAGGATTAATGGGTCCATCTCTAGGTTGGCAACAGAAGAAAAATCACTTGTATGTGGAGTTGGCTTAGAAGATGGGTCTGTCTGTATGGAAGTCCCAGTACATGGAAGGAAGAGGTGTGAACTACATAAAGGAAGGAGGATCAGCACTTCACATATTACCACTCTAAGAAAATTATAG 1248 0.4399 MSTEDLQGIFNFPEGCFRFGNLFKRFKHSMKSKAEVYNGHVRAMGATEISSTPRLKREECKRTKHDSVFSKWQILIGPTDWENFSLGKDGIERYRIQNLPVSSSCPGLYELGIAASHTVLGRDVRKLDQDRIVVVYLGQADNVRTRLQHYGRAGSHLDHGNSVLVGHPNESSCFQRGPGLFREIFSRGFPIMFRWAPSFLNVVQMENKKEAEKTEVQLLGIFDYAWNKGGNGVRRPNDILLKLDKITSSTTPFPNIARKLQQWMWDHAFGLIQEGIKIKASKLASTRAQSSTCSDWESENLRSQIFKFGRSQPRIVLDKYVVNEDHTTICGVAIGEGFVCTRRPVEGRKRCGEHKGKRINGSISRLATEEKSLVCGVGLEDGSVCMEVPVHGRKRCELHKGRRISTSHITTLRKL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00378 415 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 45 371 IPR038909 GO:0003677|GO:0006355
Eupl09g00378 415 Pfam GIY-YIG domain-containing protein 69 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00378 Eupl-Chr9 10144427 10154411 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00378 55 406 HRT Transcription Factor Family AT5G56780 44.892 4.38e-88 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Eupl09g00378 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00378 - - psom:113348020 452.21