Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00376 ATGGAGACGGGTGAATGCTCCTACTCCAGGTTGAAGAGAGAGGACTGTAAAAAAACCAACCACGACTCTAGTTTCACTGATTGGGAGGTTCTAATTGGGCCTTCTGACTGGGAAAATCATTCACTGGGTAAGAATGGAATAGAGAGATACAGGACTCAGAACCTTCCAATAAGTTCATATCCAGGTGTGTATGAGATCGGCATAGCTCCATCTCACACTGACGCAGGCCGTAGAGTTCGCAAACTTGATCCGAATAACATTACTGTCGTTTATCTTGGAAAAGCTGACAATATTAAGCCAAGACTTCAGGAATACGGCCGAACAGGTTCTCATTTGGACCATGGCATCTTAATTTGTCATCCAAATGAAAATAAGAGCGCGCATTGTTTCCCAACAGGACCTGGATTTTTTAAGGAGGCATTCTCGAAGGGCTATTCTATCGTGTTTAGATGGGCTCCGACGAAAAGCAAGAAGGATGCTGAGAAAAAAGAAGCACAGCTGCTTGATACATTCGATTATGCATGGAACAAAGGTAGGAATGGCACTCGTCGCCCTGATGATATTTACCCTAAACTCAGTACGAAAACAACTTCAAGCAGCAGCTTGTGTCTCAATACTGCTAGAAAGCCCCAACAATGGAATTGGGTCGACCCCTCTTTTGGTCAGGGGAGAGAGGGGTTCAGGATCAAAATAAGCACACCACTATCAAAAGAGACTAATTACTGGGAGAGTACTGATGATCTCTGTACTCGAATTGTCAAATATGGTGTACCACAGCCTCGATCGGTCTCTTTCAAATGTGATGGCGTTAATGACGACTATACTACTATTTGTGGAGTGAACTTAGGTGATGGGTCTCTTTGTAGAAGAAGACCAATTGAAGGAAGAAAAAGGTGTGAGGGGCATAAAGGGAAGAAGATTACCAATCTAAGGGACCCCCCTTTTGGTCAGGAGCAAGTGGGGTTCGGGACCAAAACAAGCACACCACTATCAAAAGAGACTAATTACTGGGAGAATACTGATGATCTCTGTACTCGAATTGTCAAATATGGTGTACCACAGCCTCGATCGGTCTCTTTCAAATGTGATGGCGTTAATGACGACTATACTACTATTTGTGGAGTGAACTTAGGTGATGGGTCTCTTTGTAGAAGAAGACCAACTGAAGGAAGAAAAAGGTGTGAGGAACATAAAGGGAAGAGGATTACTGAGTCCATTTCTACATCAATAACAGAATGGAAATCACATGAAGGGAATTCACATGTATGTGGTGTGGACTTAGGATATGGGTGTGTGTGTATGAAAGTCCCAGTTCAAGGAAGGAAGAGGTGTGAATTACATAAAGGAAGAAGGGTCACCACTGAACAAATTATACCTGAGAGAATATCACAGTCAGATGTGTGTGGTGTGAACTTAGAATATGGGTATGTTTGTATGAATCTTCCAGTGCAAGGGAGGAAGAGGTGTGAACTACATAAAGGAAGGAGAGTCATCACTCAAGACTATATCCCTGAGAGAACATCACTTGTGTGTGGTGTGGGCTTACAAAATGGATCTGTTTGTATGAGAGCCCCAGTGAGTGGAAGGGTGAGGTGTGCAATACATAAAGGTAGGAGGGTCTGA 1623 0.4331 METGECSYSRLKREDCKKTNHDSSFTDWEVLIGPSDWENHSLGKNGIERYRTQNLPISSYPGVYEIGIAPSHTDAGRRVRKLDPNNITVVYLGKADNIKPRLQEYGRTGSHLDHGILICHPNENKSAHCFPTGPGFFKEAFSKGYSIVFRWAPTKSKKDAEKKEAQLLDTFDYAWNKGRNGTRRPDDIYPKLSTKTTSSSSLCLNTARKPQQWNWVDPSFGQGREGFRIKISTPLSKETNYWESTDDLCTRIVKYGVPQPRSVSFKCDGVNDDYTTICGVNLGDGSLCRRRPIEGRKRCEGHKGKKITNLRDPPFGQEQVGFGTKTSTPLSKETNYWENTDDLCTRIVKYGVPQPRSVSFKCDGVNDDYTTICGVNLGDGSLCRRRPTEGRKRCEEHKGKRITESISTSITEWKSHEGNSHVCGVDLGYGCVCMKVPVQGRKRCELHKGRRVTTEQIIPERISQSDVCGVNLEYGYVCMNLPVQGRKRCELHKGRRVITQDYIPERTSLVCGVGLQNGSVCMRAPVSGRVRCAIHKGRRV* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00376 540 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 314 417 IPR038909 GO:0003677|GO:0006355
Eupl09g00376 540 Pfam GIY-YIG domain-containing protein 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00376 Eupl-Chr9 10116589 10122340 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00376 314 540 HRT Transcription Factor Family AT5G56780 34.066 5.94e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Eupl09g00376 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00376 - - psom:113348020 447.588