Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00370 ATGATGCACCGCACTTCTTTGGTATCCCATAATATAATGGAGAACGATATATTCAATGCTTCACTAGAGATTACTGATCGAAATACAATGGTGATTGATGGGATCGTATCACATACATTCCCAGGTTCACTTGTTCAGCCAGATTCACTGGATCTTAACAGCCGGAACCACATCATGGCTGGGTATCCTTTGCTATCAACACTGCAGGGAGAACCCAGAAATGATATTGACATAACAAATCATGGTGCGATTGTTAATGCAGAGGCATCAGTTTCTAGAAATATGCCACTCAATAGACACACTGTCAGAGATGCTTCAGTCCACAGTTTCACTTCCATCGGTAAAGCTGATTTTCAAGAGCAATTCATGGGAGGAGCATCTTTATCTACTACGTCACTTCCTAACCTTTTGGCTTCAAGCACCGGTCTGCATGAAAATCTCAATGGGGTGCCAATTTCTTCCACCTCAGGATTGCCATTAGAAGCATTGAGTATTTTCATTTCAAATGGTTTCTGCAATACTTCAAATTCTACTATCACAACCTCTGTGAACTGTGGATATGATGGAGTGCAAGGTGACATGGAGTTTTTAGCTCCCAAGAAAGATGCCAGTGGGACTGGCCAACTAAATGGTAAATGGGGCTTTGACAAGCTTTTGGGTCCTCTAGAACTTGCAGGAAAACCCCCCATAAGAACAGTGTATCAACCAAACCATTTCATAGGAAGCTTGGATCCAACTGGGTGGATTTCATCAAACAAGTCTGATGCGAGTGCAGATCATCCGTATGGCTACTCTATTCCCAGTAATGAGCTGTCCCTAAGTCTCGCCACGTGCCAGCCTTCTATTATCAATGGGTCAACAATCCCAGATCAATGCTCCGAAATAAGCTGTTCTGGTGTCACTCAGGATTCTATACACGAAGTTGGATTGGGAGTGGGGTTGGGTTCCAAACAAACCTCTAGCAATAAGGAACTTTCTCTGGGTTTTGGTTCTTATAGGTCAGTTCAGTTCTCACATTTATCATCTGGGTCGAAATATCTCCGTGTAGTCCAGCAATTACTTGCTGAAGTTGCAAGCTATTCACTTGGAAATCTAGATCACCTGAATGGTTTGTCAGAAGGGGTTGGGATTGAGGCGAAGATGTCATTTTCTTCGAGTTGCACTGGTCAGAGGGGGATTTCAGTTACTAGGTCTGATGAATTTCCTTATTCTGCTGGAGAAACCAGATCTGAGGATCAAATGAACCGGAGGTTGCAAAGACAGGAGATCGAAGTCAAGAAAGCTCAACTGTTGGCTCTGCTACAAGTGGTTGATAGCAGATTCAACCAATGCTTGGATGAGATCCACGTGGTCATATCTGCATTCCATGCTGCAACTGAGTTGGACCCTCAGATACATGCTCGTTTTGCCCTTCAGACAATATCTCTCCTATATAAAAACCTGAGGAAGAGAATCACTAACCAAATCCTAATGACCGGAGAAGGCCGTAGCAGTGGGTCCACAACAGAGGAGAGATTGTTCGAGTCTTCTATTATCCCAAAGCAATGGGCTCTTCAGCATCTAAAGAGAAATGATCATGAATTGTGGAGACCACAAAGAGGCTTGCCAGAAAAATCTGTCTCAGTTTTACGGGCGTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAGGACACCGAGAAGCATTTACTCGCGGTAAAAAGTGGATTGACAAGGAGCCAGGTATCCAATTGGTTCATTAATGCACGAGTACGTCTATGGAAACCAATGATAGAAGAAATGTACTCAGAGATGAGCAATAGAAAGGGTCGCCAAACTTGA 1821 0.4349 MMHRTSLVSHNIMENDIFNASLEITDRNTMVIDGIVSHTFPGSLVQPDSLDLNSRNHIMAGYPLLSTLQGEPRNDIDITNHGAIVNAEASVSRNMPLNRHTVRDASVHSFTSIGKADFQEQFMGGASLSTTSLPNLLASSTGLHENLNGVPISSTSGLPLEALSIFISNGFCNTSNSTITTSVNCGYDGVQGDMEFLAPKKDASGTGQLNGKWGFDKLLGPLELAGKPPIRTVYQPNHFIGSLDPTGWISSNKSDASADHPYGYSIPSNELSLSLATCQPSIINGSTIPDQCSEISCSGVTQDSIHEVGLGVGLGSKQTSSNKELSLGFGSYRSVQFSHLSSGSKYLRVVQQLLAEVASYSLGNLDHLNGLSEGVGIEAKMSFSSSCTGQRGISVTRSDEFPYSAGETRSEDQMNRRLQRQEIEVKKAQLLALLQVVDSRFNQCLDEIHVVISAFHAATELDPQIHARFALQTISLLYKNLRKRITNQILMTGEGRSSGSTTEERLFESSIIPKQWALQHLKRNDHELWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDTEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYSEMSNRKGRQT* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00370 606 CDD homeodomain 529 590 IPR001356 GO:0003677
Eupl09g00370 606 Gene3D - 523 603 - -
Eupl09g00370 606 ProSiteProfiles 'Homeobox' domain profile. 526 589 IPR001356 GO:0003677
Eupl09g00370 606 Coils Coil 411 431 - -
Eupl09g00370 606 SMART prehox3 335 487 IPR006563 -
Eupl09g00370 606 Pfam Homeobox KN domain 546 585 IPR008422 GO:0003677|GO:0006355
Eupl09g00370 606 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 274 599 - -
Eupl09g00370 606 SMART HOX_1 529 593 IPR001356 GO:0003677
Eupl09g00370 606 SUPERFAMILY Homeodomain-like 530 599 IPR009057 -
Eupl09g00370 606 Pfam Associated with HOX 343 486 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00370 Eupl-Chr9 10033093 10036111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00370 269 602 Homeobox Transcription Factor Family AT4G32980 51.940 2.77e-98 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl09g00370 POX 6.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00370 - - ming:122074906 697.197