Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl09g00346 ATGCAAGATCCAACAAATTTTGAACAGATCAAACCCCATTTTCCGGAGCAAGAGCACCTGAAATGCCCTCGCTGTGATTCAACAAACACCAAATTCTGCTATTACAACAACTACAATCTTTCCCAACCACGCCATTTCTGCAAGAACTGCCGACGTTATTGGACTAAAGGGGGTGCTCTGCGAAATATACCAGTTGGTGGGGGAAGCCGGAAGAATTCCAAGCGTTCATCGAGCACGAAACGGTCTTCATCTTCTTCTTCGTCGTCTTCGACCCAGAATGTCGTCCCGAAGCCTGAACCCACTGGAATTTACGGCACGGCTGTGATGCCGATGGATCAGGACCGTAGAATGCTTGACATCACGGGGAGTTTCAGCTCTTTGTTGGCTTCAAATGGGCAATATGGAAATCTATTAGATGGGATGAATCAGAGTGTTTCAAATGTTCGGACAGTACAGTTCGGGGAATTCCTTGATCATTCGGAGAATTTGAGTTCTGTCGGGAATCCGACATTGGAGTTGCAGAGCACTAGCAATCCGGAGACCTTCTTGGGCATCCAAGGCGGCGATTCGAGCTGTTGGGGTGGTGGAAATGGTTGGCCTGATCTTGCCATTTACACACCAGGTTCGAGCTTTCAATGA 639 0.4804 MQDPTNFEQIKPHFPEQEHLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNSKRSSSTKRSSSSSSSSSTQNVVPKPEPTGIYGTAVMPMDQDRRMLDITGSFSSLLASNGQYGNLLDGMNQSVSNVRTVQFGEFLDHSENLSSVGNPTLELQSTSNPETFLGIQGGDSSCWGGGNGWPDLAIYTPGSSFQ* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl09g00346 212 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Eupl09g00346 212 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 160 IPR045174 GO:0003700|GO:0006355
Eupl09g00346 212 MobiDBLite consensus disorder prediction 61 106 - -
Eupl09g00346 212 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Eupl09g00346 212 MobiDBLite consensus disorder prediction 69 97 - -
Eupl09g00346 212 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl09g00346 Eupl-Chr9 9703860 9705515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl09g00346 5 149 C2C2-Dof Transcription Factor Family AT1G51700 55.030 7.21e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl09g00346 zf-Dof 1.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl09g00346 - - ming:122064379 313.538